Xanthomonas hortorum: XJ27_18040
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Entry
XJ27_18040 CDS
T05082
Name
(GenBank) Ion channel protein
KO
K05802
potassium-dependent mechanosensitive channel
Organism
xhr
Xanthomonas hortorum
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhr02000
]
XJ27_18040
Transporters [BR:
xhr02000
]
Other transporters
Pores ion channels [TC:
1
]
XJ27_18040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
DUF3772
MS_channel_3rd
DUF6779
Motif
Other DBs
NCBI-ProteinID:
ASW48624
LinkDB
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Position
complement(4164392..4166815)
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AA seq
807 aa
AA seq
DB search
MRRVLLLAALWMVCVGAAVAQDDDTLLENAQTQLDSMQKVLSQADTGMDKADKDQLGKLT
DDVTGAQRQAQDLVRTLEPPLKELNVRLEGLGVAQKNEPTDLREQRQSLTKQRDRLDAEF
KRATLLVSNAKDLADRLERERVQRFSVQLSTRVASPLSPTLWNQIAQQWPDDRARLQALS
AKTVQMLQAGTAANGVGGLITAAVIALLLALPMRIFLRHLGRRYAASRAPGGRLRRSGLA
LWFLLVGTLSLGIAAFVLVEGISALGELPDDLDQLLTGFVAVSLVAAFVGSLSASLLMKH
QPSWRLFPLDDATVDRLRVHCLATAAVIWLSGMAAKISEAAGSSPALTTATDAVAALLYA
GLILSALAGLSLSLRAQAATAGAVDPDSDAPTPVVSRGGGFIVLIRLLGHLAVIFALISA
LFGYLNLALFVERQIIWITLICSLLGLLVVFADDLMSWMFNPDGRFSRALSHALSIGSGR
LVQLGLLLSAATRVLLVLLGIAVLLTPYGANINVVTGWAENITHGIPIGKELVITPSDVF
RALCVFLLGMGLVHVVQQWLLNTYLPKTELDDGARNSISTVARYLGWLIVAIWGLTALGL
DLKRLALVLSALSVGIGFGLQAITQNFVSGLILLAERPVKIGDWVRIGDQEGDVRKISVR
ATEIQVGDRSTLIVPNSELITKSVRNMTLSNPMGRVQLQFSVPLEAEVAKVRDMLLELFA
EHTKVLAEPAPAVFIDSLAGGHVNFNSFAYVRSPRDAYGVRSELFFALLQRMETVGIALQ
SPQEIRFSRAGAAVARDAGDGTPASED
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcgtgtgctgttgctggctgcgttatggatggtgtgcgtgggcgccgcagtggcg
caggacgacgacacgctgctggagaacgcgcagacccagctggacagcatgcagaaggtg
ctgagccaggccgacaccggcatggacaaggccgataaggaccagctcggcaagctgacc
gacgacgtcaccggcgcgcagcggcaggcgcaggatctggtccgcacgctggagccgccg
ctgaaggagctcaacgtgcggctggaggggctgggcgtcgctcaaaagaacgaaccgacc
gacttgcgcgagcagcgccagtcgctgaccaagcagcgcgatcggctggatgccgagttc
aagcgcgccacactgctggtctccaatgccaaggacctggccgatcggctcgaacgcgaa
cgggtgcaacgcttcagcgtgcagctctccacgcgtgtggcctcgccgctgtcgccgaca
ttgtggaaccagatcgcacagcaatggcccgacgatcgtgcccgtctgcaggcgctttcc
gccaagacggtgcagatgctgcaggcgggaactgcagccaatggcgtgggcgggctgatc
accgccgccgtgatcgcgttgctgctggcactcccgatgcggatattcctgcgccacctg
gggcgccgttacgcagcctcgcgtgcgcccggcggacgcctgcgacgctccgggctggca
ctgtggttcttgctggtcggtacactgagccttggaattgcggcgttcgtgctggttgaa
ggcatcagcgcgcttggcgagctgccggacgatctggatcaactgctgaccgggtttgtc
gccgtcagtctggtggccgccttcgtcggttcgctcagtgcaagtctgttgatgaagcac
caacccagctggcgcttgtttccgctggacgatgccaccgtcgatcgcctgcgcgtgcat
tgcctggctaccgccgcggtcatctggctcagcggcatggccgcaaagatcagtgaagcc
gcaggcagcagccctgcgctgacgaccgccaccgatgcggtcgccgcgttgttgtatgcg
gggttgatcctgtcggcgctggccggcctgagcctgtcgttgcgggcgcaggcggcgact
gcgggcgcggttgatcccgacagcgatgcgccaacgccggtggtgtcgcggggcggcggc
ttcatcgtgctgattcggctgctgggccatctggcggtgatcttcgccttgatatcggcc
ttgttcggctacctcaatctggcgttgttcgtggagcggcagatcatctggatcaccctg
atctgcagcctgctcggtttgctggtggtgtttgccgacgatctgatgagctggatgttc
aatcccgacggccgtttcagccgcgcgctgtcgcatgcgctgagcatcgggagcggacgc
ctggtccagctggggctgctgctgtccgcagcaacgcgggtgctgctggtgctgttgggc
atcgcagtgctactgacgccttatggagccaacatcaatgtggtgaccggctgggcggag
aacattacccacggcatccccattggcaaggaactggtgatcacccccagcgatgtgttc
agggcgctgtgtgtgttcctgctcggcatggggctggtgcacgtggtgcagcagtggctg
ctcaacacctatttgcccaagaccgagctcgatgacggtgcgcgcaactccatcagtacg
gtggcgcgctatctgggttggctgatcgtggcgatctggggcctgaccgcgctggggctg
gatctgaagcggctggcgctggtgttgagcgcattgtcggtgggtatcggtttcggtctg
caggcgatcacgcagaacttcgtgtccggcctgatcctgctggccgagcggccggtaaag
atcggcgattgggtgcgcattggtgaccaggagggcgatgtgcgcaagatcagcgtgcgc
gccaccgaaattcaagtaggcgaccgctccaccctgatcgtgcccaactcggaattgatc
accaagagcgtacgtaacatgacgctgtccaacccgatgggccgggtgcagctgcagttc
tcggtgccgctggaagcagaggtggccaaggtgcgcgacatgttgctggaactgttcgcc
gagcacaccaaggtgctggccgagccggcgccggcggtgttcatcgattcgctggccggc
ggccacgtcaacttcaattcgttcgcctatgtccgcagcccgcgcgatgcatatggcgtg
cgcagcgagttgttctttgcgctgctgcagcggatggaaacggtgggcattgcgctgcaa
tcgccgcaggaaattcgtttcagccgtgcgggcgcggcggtggcgcgcgatgcaggcgat
ggcacgcctgcatcggaagactga
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