Xanthomonas hortorum: XJ27_21205
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Entry
XJ27_21205 CDS
T05082
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xhr
Xanthomonas hortorum
Pathway
xhr00300
Lysine biosynthesis
xhr00470
D-Amino acid metabolism
xhr01100
Metabolic pathways
xhr01110
Biosynthesis of secondary metabolites
xhr01120
Microbial metabolism in diverse environments
xhr01230
Biosynthesis of amino acids
Module
xhr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XJ27_21205
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XJ27_21205
Enzymes [BR:
xhr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XJ27_21205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
Motif
Other DBs
NCBI-ProteinID:
ASW48174
LinkDB
All DBs
Position
complement(4954014..4955309)
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AA seq
431 aa
AA seq
DB search
MSLRIDTAAVMEALPHLREHSDGPLCAYVYDLAALDAHAAWMRAQLPAECELFYAAKANA
EPPILRTLAPHMDGFEAASGGELAWLHAQQPQAALLLGGPGKLDSELAQAAALPDCTVHV
ESLGELERLAAIAAQAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPDDLDAAVHR
LRASPSLRLEGFHFHLMSHQRDAGAQLHLIATYLRTVQQWRQRYGLGPLRVNAGGGFGVD
YLAPESSFDWAGFCAGLPALLGEHGDALRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWF
AIARGGTHHFRTPAAQGHDHPFRVLRGARAPVLRDTPVTLVGQLCTPKDVLARNQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPVAAQATASASASVERRTGTRMSARS
SSSATVSGSSR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgacaccgccgcagtgatggaggcgttgccacacctgcgcgaacac
agcgatggcccgctctgcgcctacgtctacgacctggcagcactggacgcacacgcggca
tggatgcgcgcgcaattgccggccgagtgcgagctgttctacgcagcaaaagccaatgcc
gagccgccgatcctgcgcacgctcgccccgcacatggacggcttcgaagccgcatcaggc
ggcgaactcgcctggctgcatgcgcaacaaccgcaggccgcgttgttgctcggcggaccc
ggcaagctcgatagcgaactggcccaggccgctgcgctgcccgattgcacagtgcacgtg
gaaagcctgggtgagctggaacgcctggctgctattgcggcgcaggccggccgctgcgta
ccggtgttcctgcgcatgaacatcgccgtgcccggggcgcagagcacgcgtctgatgatg
ggcgggcagccctcgccgttcggcctggacccggacgatctggatgcggcggtccatcgg
ctgcgtgcgagcccctcgctgcgactggaaggcttccatttccatctgatgtcgcaccag
cgcgatgccggcgcgcagctgcacctgatcgccacctatctgcgcaccgtgcagcagtgg
cggcaacgctacgggctcggcccgttgcgggtgaacgccggtggcggtttcggcgtggat
tatctggcgccggaatcctcgttcgactgggccggcttctgcgccggcttgcctgcgttg
ctaggcgaacatggcgacgcactgcgtctgcggttggagccggggcgctatgtcagtgcc
agctgcggctggtatctgatggaagtgctggacctcaagcgcagccacggcgcgtggttt
gcgatcgcccgcggcggcacccatcacttccgcactcccgccgcgcaaggccacgatcac
ccgttccgtgtgctgcgtggcgcgcgtgccccagtgctgcgcgacacgccggtgacgctg
gtcgggcagttgtgcacgcccaaggacgtgctggcacgcaatcagcctgtcgcagcattg
gcgccgggcgactgcctggccttcccgctggccggcgcgtatgcgtggaatatttcgcac
cagcagttcctgatgcatccacctccgcagatggtgttcctgccggtggcggctcaggca
actgcatccgcatccgcttccgtagaacgccgcaccggcacccggatgtctgcacgcagc
tcgtcctctgccactgtttccgggtcgtccaggtag
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