Xanthomonas hyacinthi: FZ025_00070
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Entry
FZ025_00070 CDS
T06345
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZ025_00070 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhy03019
]
FZ025_00070 (pcnB)
Enzymes [BR:
xhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FZ025_00070 (pcnB)
Messenger RNA biogenesis [BR:
xhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FZ025_00070 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
QGY75147
LinkDB
All DBs
Position
complement(14657..16021)
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AA seq
454 aa
AA seq
DB search
MINPPAPSPFTLQLIPRDQHNVSRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVELQ
PKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDRELD
NGRLVRDNVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFADVQARRMRMIGDPEQR
YREDPVRMLRAVRLAAKLDFEIESATAEPLPRLAGLLAEAAPARLFEEVLKLFLSGDGVA
SFEGLERYGLLAALFPESAAALNSNRSGALRRMLIEGLRNTDARVANDEPVSPAFLFALL
LWPAYCRALMALQKQGMQLEEAQRRAADRVTLHQLSTVALPRRFSLPMQEIWLLQSRFTS
RQKKRVVRTLSHPRFRAAFDFLILRQSASAEHEADIAYWRELQQQPGYAPPPRGFDPEID
YVGDEVAMAPADSEETPKRRRRRRRRPDAAAPAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atcatcaacccgccagctccatcgccgttcactctgcagctgatcccgcgcgatcagcac
aacgtctcgcgcaaggacatcagtcccaatgcgttgcgcgtgctgtaccggctgcgcgaa
gccggcttcggcgcgtacctggtcggcggcgcggtccgtgacctgctggtcgaactgcag
cccaaggacttcgacgtcgccaccgacgccacccccgagcaggtcaagcagctattccgc
aactgccgcctgatcggccgccgcttccgcctggcgcacgtggtctacggccgcgagatc
atcgaggtggccacgttccgcgccaacgtcgacgacggcagcggcgaccgcgaactcgac
aacggccgcctggtccgcgacaacgtctacggcagcatcgaggacgacgcggtgcgccgc
gacttcacctgcaacgcgctgtactacgcgatcgaggatttctcggtgcgcgactacacc
ggcggcttcgccgacgtgcaggcgcggcggatgcgcatgatcggcgaccccgagcagcgt
tatcgcgaagacccggtgcgcatgctgcgcgcggtgcgcctggcggccaagctggatttc
gagatcgagtcggccaccgccgagccgctcccgcgcctggcagggctgctggccgaagcg
gcgccggcacggctgttcgaggaagtgctgaagctgttcctgtccggcgacggcgtggcc
agcttcgaaggcctggagcgttacggcctgctcgccgcgttgttcccggagagcgcggcg
gcgctcaattccaaccgcagcggggcgctgcggcggatgctgatcgagggcctgcgcaac
accgatgcgcgcgtggccaacgacgagccggtgtcgccggcgttcctgttcgcgctgctg
ctgtggccggcctactgccgtgcgctgatggcgctgcagaagcagggcatgcagttggaa
gaagcgcagcgccgcgccgccgaccgggtgaccctgcaccagctgagcacggtcgcgttg
ccgcggcgcttctcgctgccgatgcaggaaatctggctgctgcagtcgcgcttcacctcg
cgccagaagaagcgggtggtgcgcacgctgtcgcacccgcgcttccgcgccgcgttcgat
ttcctgatcctgcgccagtcggcctcggccgagcacgaagccgacatcgcctattggcgc
gaactgcagcagcagccaggctacgcgccgccgccgcgcggcttcgatccggagatcgac
tacgtcggcgacgaggtggcgatggccccggccgacagcgaggaaacccccaagcgccgc
cggcgccggcgccggcgtccggatgccgccgcaccggccgagtga
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