KEGG   Xanthomonas hyacinthi: FZ025_02460
Entry
FZ025_02460       CDS       T06345                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
xhy  Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xhy03016]
    FZ025_02460 (rnd)
Enzymes [BR:xhy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     FZ025_02460 (rnd)
Transfer RNA biogenesis [BR:xhy03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    FZ025_02460 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: QGY75581
LinkDB
Position
536594..537682
AA seq 362 aa
MPYWIKQPAELAERLAQRPARIGLDTEFVRERTYWPQLALVQMAVADEILLIDPLIPGMP
QALAPWLSDPAILKVMHSASEDLVAFKCACGALPRPLFDTQIGAGLAGIGAGMGYQKLVL
EITGVHLAKGETRSDWLRRPLSPAQLEYAADDVRHLFAIHDALLARLQLLDRSAWLHEDG
ERLLGTVEHDEGERWPQLGMRAAQFMDPPSQQRLLRLLRWRDVQARHSDKPRSWILDNEL
AATLARFPPGERHALQAMLDKHPKAPRKLGDALWQALTTPLPDEADAPLALASSDDNKAA
LKRLQDAVSARSAELGLPDGLLASRKHLEALLESGQWPQPLAGWRQRELEATLQPLLGRA
AD
NT seq 1089 nt   +upstreamnt  +downstreamnt
gtgccctattggatcaagcaacccgccgagctggccgaacggctggcgcagcgcccggcc
aggatcggcctggataccgaattcgtccgcgaacgcacctactggccgcaactggcgctg
gtgcagatggcggtggccgacgaaatcctgctgatcgacccgctgattcccggaatgccg
caggcgctggcgccgtggctgtcggacccggccatcctcaaggtcatgcacagcgccagc
gaagacctggtcgcgttcaaatgcgcctgcggcgcgctgccgcggcccttgttcgatacc
cagatcggcgccggcctggccggcatcggtgccggcatgggctaccagaagctggtcctg
gaaatcaccggcgtgcacctggccaagggcgagacccgctcggactggctgcgccgcccg
ttgtcgccggcgcagctggagtacgccgccgacgacgtgcgccacctgttcgcgatccac
gacgcgctgctcgcgcggctgcagttgctggaccgcagcgcctggctgcacgaggacggc
gagcgcctgctcggcaccgtggagcacgacgaaggcgagcgctggccgcagctgggcatg
cgcgccgcacagttcatggatccgccgtcgcagcagcgcctgctgcgcctgctgcgctgg
cgcgacgtgcaggcccggcacagcgacaagccgcgcagctggatcctggacaacgaactg
gccgccaccctggcgcgcttcccgccgggcgagcgccacgcgctgcaggcgatgctggac
aagcaccccaaggcgccgcgcaagctcggcgacgcgctgtggcaggcgctgaccacgccg
ctgcccgacgaagcggacgcgccgctggcgctggcctccagcgacgacaacaaggccgcc
ttgaagcgcctgcaggacgcggtctccgcacgcagcgccgaactcggcctgcccgacggc
ctgctcgcctcgcgcaaacacctggaagccttactggaaagcggccaatggccgcagccg
ctggccggctggcgccagcgcgaactggaagcgacgctgcagccgctgctcggccgcgcc
gcggactaa

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