Xanthomonas hyacinthi: FZ025_02510
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Entry
FZ025_02510 CDS
T06345
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FZ025_02510 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhy03019
]
FZ025_02510 (pnp)
03016 Transfer RNA biogenesis [BR:
xhy03016
]
FZ025_02510 (pnp)
Enzymes [BR:
xhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FZ025_02510 (pnp)
Messenger RNA biogenesis [BR:
xhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FZ025_02510 (pnp)
Transfer RNA biogenesis [BR:
xhy03016
]
Prokaryotic type
tRNA degradation factors
FZ025_02510 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_PNO1_2nd
DUF7680
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QGY75587
LinkDB
All DBs
Position
complement(544928..547036)
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYILNPTITELKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHRELQKVINIINELTVEAGTKPSDWVAPAKNEG
MIAALKEAVGDQLASAFQVRDKLQRRDAISAIKKDVLAQLAPRAPVEGWVVADLSKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVKAGVLPRTHGSALFTRGETQAIVITTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGEDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTSPRSELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVSDVLKEGDLVKVKVLEVDKQGRIRLSMKAVEEGEGVTAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggcgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctgacggtc
gactatcaggagaagttctacgccggcggccgcatccccggcggcttcttcaagcgcgag
ggccgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgcgctgtcgctggcc
ggcaccccgttcaacggcccgatcggcgccgccaaggtcggttacaagaacggcgaatac
atcctcaacccgaccatcaccgagctgaaggattcgcagctggagctggtcgtggccggt
accgccaacgcggtgctgatggtcgaatccgaagcggcgctgctgtccgaagaagtgatg
ctgggcgcggtcacgttcggtcatcgcgagctgcagaaggtcatcaacatcatcaacgag
ctgaccgtcgaagccggcaccaagccgtcggactgggtcgccccggcgaagaacgaaggc
atgatcgcggcgctgaaggaagcggtcggcgatcagctggcctcggcgttccaggtgcgc
gacaagctgcagcgccgcgacgcgatctcggcgatcaagaaggacgtgctggcgcagttg
gcgccgcgcgcccccgtcgaaggctgggtcgtggccgacctgtccaaggaattcggcgag
ctggaataccagaccatgcgcggctcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacacggtgcgtccgatcagcgtcaaggccggcgtgctgccgcggacccacggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtgatcaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtcagcggcgagtacaaggaaaacttcctgttccac
tacaacttccccccctactcggtgggcgagtgcggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggcgtgctggcagtgatgccgagcatggaa
gagttcccgtacacgatccgcgtggtctcggaaatcaccgagtccaacggttcctcgtcg
atggcctcggtgtgcggcagctcgctggcgctgatggacgccggcgtgccgatcaaggcg
ccggtcgcgggcatcgcgatgggcctggtcaaggaaggcgaggacttcgtggtgctgtcg
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggccctggcgcaggccaaggccggccgcctgcacatcctcggcgagatggccagt
gcgctgaccagcccgcgttcggagctgagcgactacgcgccgcgcctgctgacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgccgcgcaggccgccaaggcgcgcatcgagcagatcacctcggacgtg
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtgtcgcagatctccagcgaccgcgtc
gagaaggtcagcgacgtgttgaaggaaggcgatctggtcaaggtcaaggtgctggaagtg
gacaagcagggccgcatccgcctgtcgatgaaggccgtggaggaaggcgagggcgtgacg
gccgaataa
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integrated database retrieval system
