Xanthomonas hyacinthi: FZ025_02520
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Entry
FZ025_02520 CDS
T06345
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xhy
Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhy03016
]
FZ025_02520 (truB)
Enzymes [BR:
xhy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FZ025_02520 (truB)
Transfer RNA biogenesis [BR:
xhy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FZ025_02520 (truB)
Prokaryotic type
FZ025_02520 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QGY75589
LinkDB
All DBs
Position
complement(547676..548602)
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AA seq
308 aa
AA seq
DB search
MPVFGPRLPRISFRRLDGIVLLDKPAGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYEAQIVLGVSTDSDDADGAVLRTRPVPPIDAATLQAALAP
LRGRIRQRAPIYSALKQGGEPLYAKARRGEAIEAPEREVEVHAIDVLAHAGERLRLHVAC
GSGTYIRSLARDLGEALGCGAHIAGLRRLWVEPFRAPQMATLERLQQLAAQDPAALEALL
LPLAAGLADFPPLRLDHAAAQRFRMGQRLRDAAWAPGAVAVFGADDVPLGLGQVDASGLL
APQRMFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttcggcccccgcctgccccgcatctccttccgccgcctcgacggcatcgtg
ctgctcgacaaaccggccggcatgagttccaacgcggcgctgcaggcggcgcggcggctg
ttccgcgccgagaagggcggccacaccggcagcctggacccgctggccaccggcctgctg
ccgctgtgcttcggcgaggcgaccaagctggccgggctgctgctgggctcggccaaggcc
tacgaggcgcagatcgtgctcggcgtgagcaccgacagcgacgatgccgacggcgcggtg
ctgcgcacccggccggtgccgccgatcgatgcggcgaccctgcaggcggcgctggcgccg
ctgcgcggacgcatccgccagcgcgcgccgatctattcggcgctcaagcagggcggcgag
ccgctgtacgcgaaggcgcgccgcggcgaagcgatcgaggcgccggagcgcgaggtcgag
gtgcacgccatcgacgtgctcgcccacgcaggcgagcgcctgcgcctgcacgtggcctgc
ggctcgggcacctatatccgcagcctggcccgcgacctgggcgaggcgctgggctgcggc
gcgcatatcgccgggctgcggcgcttgtgggtggagccgttccgcgcgccgcagatggcg
accctggagcggctgcagcagctggccgcgcaggacccggcggcgctggaggcgctgctg
ctgccgctggccgccggcctggccgatttcccgccgctgcgcctggaccatgctgcggcg
cagcgtttccgcatgggccagcgcctgcgcgatgccgcctgggcgccgggtgcggtcgcg
gtgttcggcgccgacgacgtgccgctggggctgggccaggtcgacgccagcgggctgctg
gcgccgcagcgcatgttcaacctctga
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