Xanthomonas hyacinthi: FZ025_03120
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Entry
FZ025_03120 CDS
T06345
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00040
Pentose and glucuronate interconversions
xhy01100
Metabolic pathways
xhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FZ025_03120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FZ025_03120
Enzymes [BR:
xhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FZ025_03120
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
QGY75703
LinkDB
All DBs
Position
complement(667814..668878)
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AA seq
354 aa
AA seq
DB search
MNIQPLKGVLALALVFCVSPAVAGPVGYGAAATGGGTATAINVATMEAMQTTIDNYSGSG
GLVLDYTGQFDFASIGNVCAQWQLPAKTVQIKNKRNITIEGGNGSSANFGLWVVGNAHNI
VIRNMTIGLLPGGEDADSISLEGNSSGEPSTIWVDHNTVFASLAKCSGAGDASFDGGIDI
KKGVHHVTVSYNYVHDYQKVALNGYSDNDSKNAAARTTYHHNRFENVESRLPLQRRGLSH
IYNNYFNNVLTSGINVRMGGVALIEANYFENANNPVTSRDSSAIGYWDLIDNYVGGGITW
SVPDSTSKPYANATAWISSKAFPQPLGYLYTAIPAAQVKAKVIATAGAGTNLAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccagccgctcaagggcgtgctcgcgcttgccctggttttctgcgtatcgccg
gccgtcgccggcccggtcggctacggtgccgccgccaccggcggcggcaccgcgactgcg
atcaacgtcgccacgatggaggcgatgcagaccacgatcgacaactattccggcagcggc
ggcctggtgctggactacaccggccaattcgacttcgccagcatcggcaacgtctgcgcg
cagtggcaattgccggccaagacggtgcagatcaagaacaagcgcaacatcaccatcgag
ggcggcaacggctcgtcggcgaacttcggcctgtgggtggtgggcaatgcgcacaacatc
gtcatccgcaacatgaccatcggcctgctgcctggcggcgaggacgccgactcgatctcg
ctggagggcaattccagcggcgagccgtccactatctgggtcgatcacaacaccgtgttc
gcctcgctggccaagtgctccggcgccggcgacgcctccttcgacggcggcatcgacatc
aagaagggcgtccaccacgtcaccgtgtcgtacaactacgtgcacgactaccagaaggtc
gcgctcaacggctacagcgacaacgacagcaagaacgccgccgcgcgcaccacctatcac
cacaaccgcttcgagaacgtggaatcgcggctgccgctgcaacgccgcgggctgagccac
atctacaacaactacttcaacaacgtgctcacctccggcatcaacgtgcgcatgggcggg
gtggcgctgatcgaggccaactacttcgagaacgcgaacaacccggtgacctcgcgcgac
agcagcgcgatcggctactgggatctgatcgacaactacgtcggcggcggcattacctgg
agcgtgccggacagcaccagcaagccctacgccaacgccaccgcctggatctcgtcgaag
gcgttcccgcagccgctgggctatctgtacaccgcgatcccggccgcgcaggtcaaggcc
aaggtcatcgccaccgccggagcgggaaccaacctggccgagtag
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