Xanthomonas hyacinthi: FZ025_04235
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Entry
FZ025_04235 CDS
T06345
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xhy
Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_04235
Transporters [BR:
xhy02000
]
Other transporters
Pores ion channels [TC:
1
]
FZ025_04235
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF748
DUF481
DUF3575
TSP_3
Motif
Other DBs
NCBI-ProteinID:
QGY75911
LinkDB
All DBs
Position
complement(895115..896221)
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AA seq
368 aa
AA seq
DB search
MNKKILTAALLGGLAVAQAASAQEFDDRWYLTGSAGFNFQNNDRGTNDAPFVTLGLGKFV
SPNWSIDGELNYQNPNFDANEDLNWSQYGISFDLRRHFIQEGRGWNPYLLFGLGYQRSEE
EFDTGGAVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAEVAYRADFDDQSVNPARAGDDK
DWFGDVLASVGVVIPLGPPPAAPVAAPAPTAAPSCADLDDDGDGVNNCDDKCPTSQPGQT
IGPDGCPVPVSLDLKGVNFDFNKSTLRPDAVAILSEATEILKRYPDLKVEVAGHTDSKGT
DAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPEGRAKNR
RTELNVQN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaattctcaccgccgcgttgctgggcggtctggccgtcgcccaggcagcg
tccgcacaggaattcgacgaccgctggtacctgaccggttcggccggcttcaacttccag
aacaacgatcgcggcaccaatgacgccccgttcgtgaccctgggcctgggcaagttcgtc
agcccgaactggtcgatcgacggtgaactgaactatcagaacccgaacttcgacgctaac
gaggacctgaactggagccagtacggcatctcgttcgacctgcgccgccacttcatccag
gaaggccgcggctggaacccgtacctgctgttcggtctgggctaccagcgctcggaagaa
gagttcgacaccggcggcgccgtgtccccgggccagcgcaaggacggcaacttcgccgcc
aaggccggcgtcggcctgcagaccaccttcgacaagcgcgttgccgtgcgtgccgaagtg
gcctaccgcgccgacttcgacgaccagagcgtcaacccggcccgtgctggcgatgacaaa
gactggttcggcgacgtgctggcttcggtcggcgtcgtgatcccgctcggcccgccgccg
gcggcaccggttgccgctccggccccgaccgctgccccgagctgcgcggacctggacgac
gacggcgacggcgtcaacaactgcgacgacaagtgcccgacctcccagcctggccagacc
atcggtccggacggttgcccggtgccggtctcgctcgacctgaagggcgtcaacttcgac
ttcaacaagtcgaccctgcgtccggacgcggtcgcgatcctgagcgaggccaccgagatc
ctgaagcgttaccccgacctgaaggtcgaggttgccggtcacaccgactcgaagggtacc
gacgcctacaaccagaagctgtcggagcgtcgtgccaccacggtgtatgactacctgacc
aagaacggcgtggacgcttcgcgtctggtcggtccgatcggttacggcgagagccgcccg
attgcgccgaacaccaacccggatggttcggacaacccggaaggccgtgcgaagaaccgc
cgtaccgagctgaacgtccagaactga
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integrated database retrieval system
