Xanthomonas hyacinthi: FZ025_05415
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Entry
FZ025_05415 CDS
T06345
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00040
Pentose and glucuronate interconversions
xhy01100
Metabolic pathways
xhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FZ025_05415
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FZ025_05415
Enzymes [BR:
xhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FZ025_05415
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QGY76130
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All DBs
Position
complement(1174858..1176012)
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AA seq
384 aa
AA seq
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MKTQSLIAPFPCTPVRALAFVLCFAGAAGSAHADASLEVATTGWAMQNGGTKGGSRAAAA
NVYSVSTAAQLKAALTASVGSNGRIIKINGIVDVSEGKAYTTTADMESRARLDIPTKTTL
IGAGSNAQIREAYLYVKANDVIIRNLTIENPWDPQPVWDPDDGSDGNWNAEYDGLTIEGA
SNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKKGANYVTISYSAFKSHEKNNLI
GSSDSASGTDSGKLKVTIHNTLFENISGRAPRVRFGQVHLYNNYHVGSASHAVYPFSHAH
GVGKESKIFSENNAFDISGVSSCDKIAANYGGSVYRDFGSLLNGKALTCSWNNSIGWTPP
YTYALLPTNKVASDVKAKAGAGKL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacagtccctcatcgcaccgttcccgtgcacgccggtccgcgcgctcgcgttc
gtactctgtttcgcaggcgcggccggcagcgcccatgccgatgccagcctggaggtcgcc
actaccggttgggcgatgcagaacggcggcaccaagggcggttccagggctgcggccgcc
aacgtctacagcgtcagcaccgccgcgcagctgaaggccgcgctgacggccagcgtcggc
agcaacggccgcatcatcaagatcaacggcatcgtcgatgtcagcgaaggcaaggcctat
accaccaccgcggacatggagagccgcgcgcgcctggacattcccaccaagaccacgctg
atcggggccggttccaatgcgcagatccgcgaggcctacctgtacgtcaaggccaacgac
gtgatcatccgcaacctcaccatcgagaacccgtgggatccgcagccggtgtgggatccg
gacgacggcagcgacggcaactggaatgccgagtacgacgggctgaccatcgaaggcgcc
agcaacgtgtgggtggaccacgtcaccttcaccgacgggcgccgcaccgacgaccagaac
ggcaccgccaacggccgccccaagcagcaccacgacggcgcgctggacgtgaagaagggc
gccaactacgtgaccatctcgtactcggcgttcaagtcgcacgagaagaacaacctgatc
ggctccagcgacagcgcctccggcaccgacagcggcaagctgaaggtgaccatccacaac
accctgttcgagaacatttccgggcgcgcgccgcgggtgcgcttcggccaggtgcatctg
tacaacaactaccacgtcggcagcgccagccacgcggtgtacccgttctcgcacgcgcac
ggcgtcggcaaggagtcgaagatcttctccgagaacaacgccttcgacatcagcggggtc
agcagctgcgacaagatcgccgccaactacggcggcagcgtgtaccgcgatttcggctcg
ctgctcaacggcaaggcgctgacctgctcgtggaacaacagcatcggctggacgccgccg
tacacctatgcgctgctgccgacgaacaaggtggcgagcgacgtcaaggccaaggcgggt
gccggcaagctctga
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