Xanthomonas hyacinthi: FZ025_05530
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Entry
FZ025_05530 CDS
T06345
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00521
Streptomycin biosynthesis
xhy00523
Polyketide sugar unit biosynthesis
xhy00525
Acarbose and validamycin biosynthesis
xhy00541
Biosynthesis of various nucleotide sugars
xhy01100
Metabolic pathways
xhy01110
Biosynthesis of secondary metabolites
xhy01250
Biosynthesis of nucleotide sugars
Module
xhy_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FZ025_05530 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FZ025_05530 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FZ025_05530 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FZ025_05530 (rfbB)
00525 Acarbose and validamycin biosynthesis
FZ025_05530 (rfbB)
Enzymes [BR:
xhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FZ025_05530 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
adh_short
NAD_binding_4
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QGY76153
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Position
complement(1199517..1200572)
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AA seq
351 aa
AA seq
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MATWLVTGGAGFIGGNFVLEAVAQGVRVVNLDALTYAGNLNTLAALQDNPDHIFVQGDIG
DRASVGRLLAEHRPDAVLNFAAESHVDRSIDGPGAFIQTNVVGTLGLLEAVRDYWKALPA
EKRDTFRFLHVSTDEVYGALGETGKFTETTAYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALSGEPLPVYGDGKQVRDWLFVSDHCQAIRTVLAK
GRSGETYNIGGNAERQNIEVVRTICALLDERHPRQDGRPRSSQITHVADRPGHDRRYAID
ASKIKSELGWEPKRTFEQGIAFTVDWYLDNQAWVRGVLDGSYRLERIGTMA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacttggctggtaaccggcggagccggcttcatcggtggcaactttgtccttgag
gctgtggcccagggtgtccgtgtggtcaatctcgatgcgctgacctatgccggcaacctc
aataccttggcagcgttgcaggacaacccggatcacatctttgtccagggggacatcggg
gatcgcgcctcggtggggcgtttgcttgccgagcaccggcccgatgccgtgctgaacttc
gccgcagagagccacgtcgaccgctccatcgacgggcccggcgccttcatccagaccaac
gtggtcggtaccttgggcctgctcgaggctgttcgcgactattggaaggcgctgcctgct
gagaagcgcgacaccttccgtttcctgcatgtttcaaccgacgaggtctacggcgccctg
ggtgaaaccggcaaattcaccgagaccacagcctatgcaccgaattcgccgtactccgcg
tccaaggcggcgtcggaccatctggtgcgcgcctttcatcacacctatgggctgcccgtg
ctgaccaccaattgctccaataattacggcccataccacttccccgaaaagctcattccc
ctcgtcatcgcgaaggcgctctctggcgagccgctgcccgtttacggcgatggcaagcag
gtgcgcgactggctgttcgttagcgaccactgccaggccatccgtaccgtgctggcgaag
ggccgctcgggcgaaacctacaatatcggcggaaatgccgagcgtcagaacatcgaagtg
gtgcgcaccatctgcgcgctgctcgatgaacgccatccccgccaggacggccgaccgcgg
tccagccagataacccatgtcgccgaccgtcctggccacgatcgccgttacgcgatcgac
gcttccaagatcaagagcgagctcggttgggagccgaagcgtaccttcgagcagggcatc
gcatttaccgtggattggtacctggacaaccaggcctgggtgcgcggcgtgctcgatggc
agctatcgccttgagcgcatcggtacgatggcctga
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