KEGG   Xanthomonas hyacinthi: FZ025_06050
Entry
FZ025_06050       CDS       T06345                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xhy  Xanthomonas hyacinthi
Pathway
xhy00010  Glycolysis / Gluconeogenesis
xhy00020  Citrate cycle (TCA cycle)
xhy00260  Glycine, serine and threonine metabolism
xhy00280  Valine, leucine and isoleucine degradation
xhy00310  Lysine degradation
xhy00380  Tryptophan metabolism
xhy00620  Pyruvate metabolism
xhy00630  Glyoxylate and dicarboxylate metabolism
xhy00640  Propanoate metabolism
xhy00670  One carbon pool by folate
xhy00785  Lipoic acid metabolism
xhy01100  Metabolic pathways
xhy01110  Biosynthesis of secondary metabolites
xhy01120  Microbial metabolism in diverse environments
xhy01200  Carbon metabolism
xhy01210  2-Oxocarboxylic acid metabolism
xhy01240  Biosynthesis of cofactors
Module
xhy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xhy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xhy_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
xhy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xhy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    FZ025_06050 (lpdA)
   00020 Citrate cycle (TCA cycle)
    FZ025_06050 (lpdA)
   00620 Pyruvate metabolism
    FZ025_06050 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    FZ025_06050 (lpdA)
   00640 Propanoate metabolism
    FZ025_06050 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    FZ025_06050 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    FZ025_06050 (lpdA)
   00310 Lysine degradation
    FZ025_06050 (lpdA)
   00380 Tryptophan metabolism
    FZ025_06050 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    FZ025_06050 (lpdA)
   00670 One carbon pool by folate
    FZ025_06050 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhy04147]
    FZ025_06050 (lpdA)
Enzymes [BR:xhy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     FZ025_06050 (lpdA)
Exosome [BR:xhy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   FZ025_06050 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored GIDA HI0933_like DAO NAD_binding_8 AlaDh_PNT_C Biotin_lipoyl_2 Thi4 FAD_binding_3 FAD_binding_2 DUF478 3HCDH_N 2-Hacid_dh_C MCRA DUF5696 GCV_H
Other DBs
NCBI-ProteinID: QGY76251
LinkDB
Position
complement(1311159..1312979)
AA seq 606 aa
MAVIEVKVPDIGDYSEVPVIEVLVAVGDTVKKDQGLLTLESDKATLEVPSAAAGVIKELK
VKLGDTLSEGAVIALLETEDAGAAPAAAPAAAKADAPASKPPVAPSHRAPAEPPARKPAL
ASGKPADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKALL
HAAAVIDEVAHAGDFGVTFSAPKIALDKLRAYKDNVVGKLTGGLASMARQRKVRTVTGVA
SFVSPSELQIVGADGKTQLLRFEQCIIAAGSQAVKLPNFPWDDKRVMDSTDALELQEIPK
TLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADQDLVKPLADRLKKQGVEVYLK
TKATAVKADKKGITVSFEAAAEGETSALGATSYDRVLVAVGRSPNGKKIGAEKAGVNVTE
RGFIPVDRQMRSNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEGIPGKGREWVARV
IPSVAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEQTH
RIVGGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITDL
YLPKKK
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggcggtcattgaggtcaaggtcccggatatcggcgactacagcgaggttccggtcatc
gaagtgctggtcgccgtcggcgacacggtgaagaaggaccagggcctgctgaccctggaa
tcggacaaggccacgctggaagtgccgtcggcggcggccggcgtgatcaaggagctgaag
gtcaagctcggcgacaccctgtccgagggcgcggtgatcgcgctgctggagaccgaggac
gccggcgccgcgccggccgccgcgcccgcggcggccaaggccgacgcgccggccagcaag
ccgccggtggcgccctcgcaccgcgccccggccgagccgccggcgcgcaagccggcgctg
gccagcggcaagccggccgacatcgaatgcaagatggtggtgctcggcgccggccccggc
ggctacaccgccgcattccgcgccgccgacctgggcctggacacggtgctgatcgagcgc
tacgccagcctcggcggggtctgcctcaacgtcggctgcatcccgtccaaggcgctgctg
cacgcggccgcggtgatcgacgaggtcgcccatgccggcgatttcggcgtgaccttcagc
gcgcccaagatcgccctggacaagctgcgcgcgtacaaggacaacgtggtcggcaagctc
accggcggcctggccagcatggccaggcagcgcaaggtgcgcaccgtcaccggcgtggcc
agcttcgtgtcgcccagcgagctgcagatcgtcggcgccgacggcaagacccagctgctg
cgcttcgagcagtgcatcatcgccgccggctcgcaggcggtgaagctgcccaacttcccg
tgggacgacaagcgggtgatggactccaccgacgcgctggagctgcaggagatccccaag
accctgctggtggtcggcggcggcatcatcggcctggaaatggccaccgtgtacagcgcg
ctgggcagcaaggtcaccgtggtcgagttcatggaccagctgatgccgggcgccgaccag
gacctggtcaagccgctggccgaccgcctgaagaagcagggcgtggaggtctacctgaag
accaaggccaccgcggtcaaggccgacaagaagggcatcaccgtgtccttcgaggccgcg
gccgagggcgagacgtcggcgctgggcgcgaccagctacgaccgcgtgctggtcgcggtg
ggccgctcgccgaacggcaagaagatcggtgcggagaaggccggcgtcaacgtcaccgag
cgcggcttcatcccggtcgatcggcagatgcgcagcaacgtgccgcacatcttcgccatc
ggcgacatcgtcggcaacccgatgctggcgcacaaggccacccacgagggcaagctggcg
gccgaagtggccgcaggcgagggcatccctggtaaaggccgggaatgggtggcgcgggtg
atcccgtcggtggcctacaccaacccggaaatcgcctgggtcggcgtcaccgagaccgag
gccaaggccaagggcctgaaggtcggcgtggccaagttcccgtgggcggccagcggccgc
gccatcggcatcggccgcaccgagggcttcaccaagctgatcttcgacgagcagacgcac
cgcatcgtcggcggcgccatcgtcggcgtgcatgccggcgacctgctggccgagatcggc
ctggcgatcgagatgggcgccgaggccgaggacatcggccacaccatccatgcgcatccg
accctgagcgagtcggtcggcatggccgccgaggtctacgacggcaccatcaccgatcta
tacctcccgaaaaagaaataa

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