Xanthomonas hyacinthi: FZ025_10055
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Entry
FZ025_10055 CDS
T06345
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy03030
DNA replication
xhy03410
Base excision repair
xhy03420
Nucleotide excision repair
xhy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FZ025_10055 (polA)
03410 Base excision repair
FZ025_10055 (polA)
03420 Nucleotide excision repair
FZ025_10055 (polA)
03440 Homologous recombination
FZ025_10055 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhy03032
]
FZ025_10055 (polA)
03400 DNA repair and recombination proteins [BR:
xhy03400
]
FZ025_10055 (polA)
Enzymes [BR:
xhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FZ025_10055 (polA)
DNA replication proteins [BR:
xhy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FZ025_10055 (polA)
DNA repair and recombination proteins [BR:
xhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FZ025_10055 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZ025_10055 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QGY76969
LinkDB
All DBs
Position
2212951..2215719
Genome browser
AA seq
922 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNPAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDDLYAQYKANRPPMPDDLRAQVEPMCQIVHALGISILREDGVEADDVIGTLALQGA
GDGLQVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPGQIVDLLALMGD
AIDNVPGVDKCGPKTAAKWLAEYGSLDGVMANADAIKGKIGENLRAALARLPLNRELVTI
KTDVALPGGPRTLALREQDPEQLRGLYQRYGFTQALRDLDGGVAAPAGAAEVTPSLRGTA
AGYARAAAPIDESLDPALAAKGEYTAIMTPEQFEELLARLRAADGFAFDTETDALDAMRA
NLVGLSFAIEPGRADYLPLGHDYPGAPVQLDRTLALAALKPLLEDPAKAKVGQHGKYDLH
VLRRHGVDVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYETVKYQDVAGKGAKQIAF
SQVAIDDATGYAAEDADITLRLHRTLSAQLDAVPALASVYREIEMPLVPVLARIEANGVS
VDMVELRRQSQDLSQRMLAAQQKATALAGRTFNLDSPKQLQAVLFDELKLPALLKTPKGQ
PSTNEEALEAIAEQHELPRVILEYRGLAKLRSTYTDKLPEMINPDTGRVHTSYHQAGAAT
GRLSSADPNLQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLLRA
FGAGVDVHRATAAEVFGRKLEEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQD
YVALYFSRYPAVRDFMERMREQARTQGYVETLFGRRLYLNDINAKQQGLRAGAERAAINA
PMQGTAADIIKRAMVTVDAWLENHRERALMILQVHDELVFEADADFVDILLPEVTRRMAG
AAALKVPLVVDSGVGDNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctc
ccgccgctgaccaaccccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggagtacgtcgccttcgtcgtcgatgcgccgggc
aagaccttccgcgacgacctgtacgcgcagtacaaggccaaccgcccgccgatgcccgac
gacctgcgcgcgcaggtcgagccgatgtgccagatcgtgcacgcgctgggcatcagcatc
ctgcgcgaggacggcgtggaggccgacgacgtgatcggcacgctggccctgcagggcgcc
ggcgacggcctgcaggtgaccatctccaccggcgacaaggacttcgcccagctggtgcgc
cccggcgtgcagctggtcaacaccatgagcggcagccgcatggactccgacgcggcggtg
atggagaagttcggcgtgtggccgggccagatcgtcgatctgctggcgctgatgggcgac
gccatcgacaacgtgccgggcgtggacaagtgcggccccaagaccgcggccaagtggctg
gccgaatacggctcgctggacggggtcatggccaacgccgacgcgatcaagggcaagatc
ggcgaaaacctgcgcgcggcgctggcgcggctgccgctgaaccgcgaactggtcacgatc
aagaccgatgtggccctgcccggcggcccgcgcacgctggccctgcgcgagcaggacccg
gagcaactgcgcggcctgtaccagcgctacggcttcacccaggcgctgcgcgacctggac
ggcggcgtggccgccccggccggcgccgccgaggtcacccccagcctgcgcggcaccgcc
gccggctatgctcgcgccgccgcgcccatcgatgaatcgctggacccggcgctggccgcc
aagggcgaatacaccgcgatcatgaccccggagcagttcgaggaattgctcgcgcgcctg
cgcgcggccgacggcttcgccttcgataccgagaccgatgcgctggacgcgatgcgcgcc
aacctggtcgggctcagcttcgcgatcgagcctggccgcgccgactacctgccgctgggc
cacgactaccccggtgcgccggtgcaactggaccggaccctggccctggcggcgctgaaa
ccgctgctggaagacccggccaaggccaaggtcggccagcacggcaagtacgacctgcac
gtgctgcgccgccacggcgtggacgtgcgcggctacgccgacgacaccatgctggaaagc
ttcgtgctcaattccaccgccagccgccacgacatggactcgctggcgcggcgctacctg
ggctacgagacggtcaagtaccaggacgtggccggcaagggcgccaagcagatcgcgttc
tcgcaggtggccatcgacgacgccaccggctacgccgccgaggacgccgacatcaccctg
cgcctgcaccgcacgctgtccgcgcagctggacgccgtgccggcgctggccagcgtctac
cgcgagatcgagatgccgctggtgccggtgctggcgcggatcgaggccaacggggtcagt
gtggacatggtcgaactgcgcaggcagagccaggacctgagccagcgcatgctggccgcg
cagcagaaggccaccgcactggccgggcgcaccttcaacctggactcgcccaagcagctg
caggcggtgctgttcgacgagctgaagctgccggcgctgctgaagacccccaagggccag
cccagcaccaacgaagaggcgctggaggcgatcgccgagcagcacgaactgccgcgggtg
atcctggaataccggggcctggccaagctgcgcagcacctataccgacaagttgccggag
atgatcaatcccgataccggccgcgtgcacaccagctaccaccaggccggcgccgccacc
gggcggctgtcctcggccgatccgaacctgcagaacatcccgatccgcaccgacgacggc
cgccgcatccgccgcgccttcgtggccccgccgggacgcaagctgatcgcctgcgactac
tcgcagatcgaactgcggatcatggcccacctgtctgaggacccgggcctgctgcgcgcc
ttcggcgccggcgtggacgtgcaccgcgccaccgccgccgaggtgttcgggcgcaagctc
gaggaggtgaccggcaacgagcgccgcgccgccaaggcgatcaacttcggcctgatgtac
ggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcaggac
tacgtggcgctgtacttcagccgctacccggcggtgcgcgacttcatggagcgcatgcgc
gagcaggcgcgcacccagggctacgtggagaccctgttcggccgccgcctgtacctgaac
gacatcaacgccaagcagcagggcctgcgcgccggcgccgagcgcgccgcgatcaacgcg
ccgatgcagggcaccgccgcggacatcatcaagcgcgccatggtgaccgtggacgcctgg
ctggagaaccaccgcgaacgcgcgctgatgatcctgcaggtgcacgacgaactggtgttc
gaggccgatgccgacttcgtcgacatcctgctgcccgaggtgacccggcggatggccggc
gccgccgcgctgaaggtgccgctggtggtggacagcggcgtcggcgacaactgggacgag
gcgcactag
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