Xanthomonas hyacinthi: FZ025_10780
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Entry
FZ025_10780 CDS
T06345
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy03420
Nucleotide excision repair
xhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FZ025_10780 (uvrD)
03430 Mismatch repair
FZ025_10780 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhy03400
]
FZ025_10780 (uvrD)
Enzymes [BR:
xhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FZ025_10780 (uvrD)
DNA repair and recombination proteins [BR:
xhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FZ025_10780 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FZ025_10780 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
InPase
Motif
Other DBs
NCBI-ProteinID:
QGY77099
LinkDB
All DBs
Position
complement(2408070..2410271)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPSGHYLVLAGAGSGKTRVLTHRIAWLNEVHGVPVHGIFAV
TFTNKAAGEMRQRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWPDAKLPESFQVLDSDDQL
RLVKRVVQQLELDEGKFPPKQIVWWINQQKDEGRRAQHIQPEPRDEWTTTLRSAYALYQE
RCDRAGLVDFAELLLRAHELLRDNPALLAHYRSRFGEILVDEFQDTNAIQYAFVRVLAGD
TGRVFVVGDDDQAIYGWRGAKVENVQRFLKDFPNAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEIDEARYVVECARQWVRDGGSYSEAAVLYRSNAQ
SRAFEESLLAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPTRGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALAQFLGLIEQLSTDVAGLPLP
EQIDQVLARSALREHWSKESRGGLDSESRTDNLDELVSVASRFVRADNDADADEGRQAMT
ELVAFLAYASLEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLAGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSASLGAPRNLGHSAIEAPAIRLGANVQHPKFGGGVVIDYEGSGAHARVQVQFDEVGA
KWLVMAYANLTVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctcccatttgctcgatgctctgaaccccgcccagcgcgaggccgtctccgca
ccgtccggccattacctggtcctggccggcgccgggtccggcaagacgcgcgtgctcacc
caccgcatcgcctggctcaacgaagtccatggcgtgccggtgcacggcatcttcgcggtc
accttcaccaacaaggccgccggcgagatgcgccagcgcaccgacctgcagctgcgcaac
ggcagccgcggcatgtggatcggcaccttccacggcctggcgcaccgcctgctgcgcctg
cactggcccgacgccaagctgccggaaagcttccaggtgctggattcggacgaccagctg
cggctggtcaagcgcgtggtgcagcagctggaactggacgagggcaagttcccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgaaggccggcgtgcgcaacacatccag
cccgagccgcgcgacgagtggacgactaccctgcgcagcgcctacgcgctgtaccaggag
cgctgcgaccgcgccggcctggtcgatttcgccgagctgctgctgcgcgcgcacgagctg
ctgcgcgacaatccggcattgctggcgcattaccgcagccgcttcggcgagatcctggtc
gacgagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgccggcgat
accgggcgcgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggatttcccgaacgcgcagaccatccgcctg
gaacagaactaccgctccagcgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgattcgggcgacggcgacccgatcgac
ctgtacgcggcctacaacgagatcgacgaggcgcgctacgtggtcgagtgcgcgcgccag
tgggtgcgcgacggcggcagctacagcgaggcggcggtgctctaccgcagcaacgcgcag
tcgcgcgcgttcgaagaatcgctgctcgccgagcaggtgccgtaccgcgtctacggcggc
atgcgcttcttcgagcgcgccgaaatcaaggacaccctggcctatctgcggctggtcgcc
aaccgcgccgacgatgcggcgttcgagcgcgcggtgaacacgcccacgcgcggcatcggc
gaccgcaccctggacgaagtgcggcgcctggcgcgcgcgcagtcgctgtcgctgtgggcc
gccgcgcaacaggccgcgcagcagggcggcgacctggccgcgcgcgcgcgcaacgcgctg
gcgcagttcctggggctgatcgagcagctgtccaccgacgtggccggtctgccgctgccc
gagcagatcgaccaggtgctggcgcgctcggcgctgcgcgagcactggagcaaggaaagc
cgcggcgggctggattcggaatcgcgcaccgacaatctggacgaactggtctcggtcgcc
tcgcgcttcgtgcgcgccgacaacgacgccgacgccgacgagggccgccaggcgatgacc
gaactggtcgcgttcctggcctacgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaggacggcgtgcagctgatgaccctgcattcggccaagggcctggagttcccgctg
gtgttcctggccggcatggaagacggcctgttccccagcgcacgctcgctggaagagagc
ggccggctggaggaagagcggcgcctggcctacgtcggcatcacccgcgcgcgccacaag
ctggtgctcagctatgccgagtcgcggcgcatccacggccaggacaactacaacgtgccc
tcgcgcttcctgcgcgagatcccgcgcgagctgctgcacgaagtgcggccgaaggtgcag
gtctcgcgcagcgcctcgctgggcgcgccgcgcaacctcggccacagcgccatcgaagcc
ccggcgatccggctcggcgccaacgtgcagcatcccaagttcggcggcggcgtggtcatc
gactacgaaggcagcggcgcgcacgcgcgcgtgcaggtgcagttcgacgaggtcggcgcg
aagtggctggtgatggcgtacgcgaatctgacggtgatctag
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