Xanthomonas hyacinthi: FZ025_12650
Help
Entry
FZ025_12650 CDS
T06345
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy02010
ABC transporters
xhy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FZ025_12650
03070 Bacterial secretion system
FZ025_12650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_12650
02044 Secretion system [BR:
xhy02044
]
FZ025_12650
Transporters [BR:
xhy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FZ025_12650
Secretion system [BR:
xhy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FZ025_12650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
SbcC_Walker_B
AAA_21
AAA_18
DUF87
NB-ARC
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
QGY77440
LinkDB
All DBs
Position
2846019..2848193
Genome browser
AA seq
724 aa
AA seq
DB search
MAPGTAKLAVALTSGASEEASQPRDEGLMGLVLLAQFHGIAADPAQLAHQFGSSGEIFDE
TALLLSAKRLSLKARFVLQPADRLNKVALPALSWQPDGQHFLVAKVSDDSVLIHDLTRQR
PQVLPRAEFDARYAGRLLLVTSRASVLGQLAKFDFRWFVPAVVKYRKLLIEVLVVSLFIQ
LFALVTPLFYQVVMDKVLVHHSITTLEVIAIGLVSIAVFDVILSGLRSYVFFHTTSKIDV
ELGARLFRHILALPLSYFESRRVGDTIARVRELENIRNFLTGQALTSVLDLLFTVVFLAV
MFYYSVWLTLIVVISLPIYALWSASITPALRKCLDEKFARGADNQSFLVETINGIGTVKA
TAVDPRVTRTWDNQLAGYVGASFRVMRLASIGQQGIQLVQKLVSIGILFFGAKLVIDGKL
SVGQLIAFNMLSGQVATPIVRLAQLWQEFQQVGISVERMGDILNTRAELPGSRMTLPPIQ
GRVTFDKVSFRYRPETAEVLSGIVLDIAPGEIIGIVGRSGSGKSTLTKLVQRLYVPERGR
VLIDGHDLALADPAWLRRQLGVVLQENFLFNRSVRENIALSDPGIPLQRVIQAAKLAGAH
DFILELPEGYDTVVGEQGASLSGGQRQRLAIARALITNPRILILDEATSALDYESEHAVM
RNMRTICQGRTVLIIAHRLSTVRHANRIVVIEKGQMVETGTHEQLVNRPNGHYARLHKLQ
EGAV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaggaacggccaaattagcggtggctctgacgtcaggagcgtccgaggaagcg
tcacaacccagggatgaggggctgatggggctggtgttgttggctcaattccatggaatt
gcagccgacccggcgcagctagcccatcagttcggtagctcgggcgagattttcgacgag
actgcgctcctgctgtccgccaagcggctgagcctgaaggcccgcttcgtcttgcagccg
gccgatcgattgaacaaggtggctctccccgccctgtcctggcaaccggatggtcagcat
tttctggttgccaaggtcagcgatgacagtgttctgatccatgacctgactcgacaacgg
cctcaagtgctgcctcgtgccgaattcgacgcccgttatgccggccgcttgttgctggtg
acctcacgcgcctcggtcttgggtcaactggccaagttcgacttccgctggttcgtaccg
gccgtggtgaagtaccgcaagttactgattgaagtgttggtggtctcgttgttcatccag
ctattcgcgctggtcacgcccctgttctaccaggtggtcatggacaaggtgctggtgcac
cacagcatcaccacgctggaagtgattgctatcgggctggtatctattgccgtcttcgac
gtgattctatcgggcctgcgcagctacgttttctttcacaccaccagtaaaatcgatgtc
gaactgggcgctcgcctgttccgccacatcctggccttgccgctgagttatttcgagtcg
cgacgggtcggcgataccatcgcccgggttcgcgagctcgagaacatacgcaacttcttg
accggtcaggccctgacctcggttctcgatttgctgttcaccgtggtgtttctggcggtg
atgttctattacagcgtctggctgaccttgatcgtagtgatttccctgccgatctatgcc
ttgtggtcggcctcgattactccggcgctgcgcaagtgcctggatgagaagttcgcccgt
ggcgccgacaaccagtccttcttggtggaaacgatcaacggcatcgggacggtcaaggct
accgccgtggatccgcgtgtcacccgcacttgggacaatcaattggctggctatgtcggg
gcctcgttccgggtcatgcgcttggcaagtatcggccagcaaggcatccagttggtacag
aagttggtcagcattggcatcctttttttcggtgccaagctggtaatcgatggcaaactg
tcggtcggccagttgatcgccttcaacatgctttccggccaagtggccactccgatcgtg
cgtctggcgcagctgtggcaggagttccagcaggtcggcatctcggtcgagcgcatgggc
gacatcctcaacaccagggccgagctacctggtagccgcatgaccttgccgcccattcag
gggcgcgtgaccttcgacaaggtgagtttccgctatcgacccgagactgccgaggtgctg
agcggcatcgtcctggacatcgctccgggagaaatcatcggcatcgtcggccgctcaggc
tcgggcaagagcaccttgacaaaattggtccagcggctgtacgtgccggaacgcgggcgg
gtgctgatcgacggccacgatctggccttggccgatccggcctggctgcgccgccaactg
ggtgtggtgcttcaagaaaactttcttttcaatcgtagtgtgcgcgaaaacattgcgctc
agcgatccaggcatcccgctgcagcgcgtgatccaggcagccaagctggccggcgcccat
gacttcattctggaattgcccgaaggttacgacaccgtggtcggggaacaaggcgcttcg
ctctccggtggtcagcgtcagcgcctggccatcgcccgggcgctcatcaccaacccgcgc
attctgattctggatgaagccaccagtgcgttggattacgagtcggaacatgcggtgatg
cgcaatatgcgcaccatctgccaaggccgtacggtgctgatcattgcccaccgcctgtcg
acggtgcgccatgccaatcgcattgtcgtgatcgaaaagggtcagatggtggaaaccggt
acccatgagcagctggtcaatcgccccaacggccactatgccaggctgcacaagctgcag
gagggtgcggtatga
DBGET
integrated database retrieval system
