Xanthomonas hyacinthi: FZ025_17330
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Entry
FZ025_17330 CDS
T06345
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xhy
Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhy03009
]
FZ025_17330
Enzymes [BR:
xhy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FZ025_17330
Ribosome biogenesis [BR:
xhy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FZ025_17330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QGY78314
LinkDB
All DBs
Position
complement(3926839..3928398)
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AA seq
519 aa
AA seq
DB search
MSDTSRKLSLNKLSLKRDAAGEQPKLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGEV
AQTGMSVKSGDRIELDGRSFVASALTEPARVLIYNKPEGEVTTREDPEGRPTIFEALPAL
KGARWIAIGRLDINTTGLLLLTTDGEMANAMMHPSYEIEREYVVRVRAPEGEDKVPDSMV
ERLSRGVLLEDGSAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKVSLPRELLRGQSLELVQDKVEALRAELKLEEGTPSALTLQPVIGQRKAAKATVQVG
RGGNAYVNGHNVADEGRELRRFDNFREDRGRGGKKPYGGLTVSGEMAAKQAQKPFKQRSP
KGPKPLPDGNPAAFRTWYVPDGVSTGPTGHRNAGPASRGGPGQGQGQGRPYGKPRPAGAG
AGAGAGAGQGAGQGRGQGQRKAHPYGHPGNAPSFPSDHANPGFSPYGAAPRPSGPRADGQ
KRGPGGPGARPAGNRPGGGRPGGGGRPGGGGNRGPRGGG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacctcccgcaagctgtcgttgaacaagctctcgctcaagcgcgatgccgcc
ggcgagcagccgaaactggaagaacgcctgcacaaggtcctggcgcaggccggcctgggg
tcgcgccgcgcgctggagcagcgcatcgccgacggcctggtcaaggtcaacggcgaggtc
gcgcagaccggcatgtcggtcaagagcggcgacaggatcgagctggacggccgcagcttc
gtcgccagcgcgctgaccgagccggcgcgcgtgctgatctacaacaagcccgaaggcgaa
gtgaccacgcgcgaggatcccgaaggccgcccgaccatcttcgaggcgctgccggcgctg
aagggcgcgcgctggatcgcgatcggccgcctggacatcaacaccaccggcctgctgctg
ctgaccaccgatggcgagatggccaacgcgatgatgcatccgtcctacgagatcgagcgc
gaatacgtggtgcgcgtgcgcgccccggaaggcgaggacaaggtgcccgacagcatggtc
gagcgcctgtcgcgcggggtcctgctggaggacggcagcgccaagttcgacgagatcgag
cgcatcggcggtaccgattcgcacgactggttccgcgtggtggtcaaggaaggccgcaac
cgcgaagtacgccggttgtgggaatcgcagggctgccaggtcagccgcctcaagcgcacc
cgctacggcaaggtgagtctgccgcgcgagctgctgcgcgggcagtcgctggaactggtg
caggacaaggtcgaggcgctgcgcgccgaactgaagctggaagaaggcacgccgtcggcg
ctgaccctgcagccggtgatcggccagcgcaaggcggccaaggccaccgtgcaggtcggt
cgcggcggcaacgcctacgtcaacggccacaacgtcgccgacgaaggccgcgagctgcgc
cgcttcgacaacttccgcgaggaccgcggccgcggcggcaagaagccgtacggcgggctg
accgtcagcggcgagatggccgccaagcaggcgcaaaagccgttcaagcagcgcagcccg
aagggtcccaagccgctgccggacggcaaccccgccgcgttccgcacctggtacgtgccc
gacggcgtcagcaccggcccgaccggccaccgcaacgccggtcccgcgtcccgcggcggc
ccgggtcagggccaaggccagggccgtccctacggcaagccgcgccccgccggtgccggt
gccggtgccggtgccggtgccggccagggcgcaggccagggccgcggccagggtcagcgc
aaggcgcacccgtacgggcatccgggcaatgcgcccagcttcccgtccgaccacgccaat
cccggtttcagcccctacggcgccgcgccgcgtccgtccggcccgcgcgccgacgggcag
aagcgcggcccgggcggcccgggtgctcgcccggccggcaatcgccccggcggcgggcgt
ccgggcggtggcggccgccccggcggtggcggcaaccgcggtccacgcggcggcggctga
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