Xanthomonas hyacinthi: FZ025_17515
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Entry
FZ025_17515 CDS
T06345
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00541
Biosynthesis of various nucleotide sugars
xhy01100
Metabolic pathways
xhy01250
Biosynthesis of nucleotide sugars
Module
xhy_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FZ025_17515 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xhy01005
]
FZ025_17515 (kdsB)
Enzymes [BR:
xhy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
FZ025_17515 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xhy01005
]
Lipid A
FZ025_17515 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QGY78351
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Position
3972275..3973066
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AA seq
263 aa
AA seq
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MSGERTAMPPPFVVAIPARYAASRLPGKPLRTLGGEPLVRHVARRALGAGAQQVWVAADD
PRIAAAVADLDGVHVALTSAAHASGTDRLAECADIAGWDDATLVVNLQGDEPFAPAAGIV
AVAQALADSGAEMATLGTPVESAESLFDPNVVKLVRSAQGDALYFSRAPIPWHRDAFAAS
RERLPPGPWLRHIGIYAYRAGFLRRFAAMPPGRLEQVEALEQLRVLEAGFRIAVALSPAP
FPPGVDTPEDLARAKAHLQGLDV
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaacgtaccgccatgccgccgcccttcgtggtcgccatcccggcgcgctac
gccgcctcgcgcctgcccggcaagccgctgcgcacgctcggcggcgagccattggtccgg
cacgtggcgcgccgcgcgctcggcgccggggcgcagcaggtctgggtggccgcggacgat
ccgcgcatcgccgcggcggtggccgacctggacggcgtgcacgtggcgctgacctcggcg
gcgcacgcctccggcaccgatcgcctggccgaatgcgccgacatcgccggctgggacgac
gccaccctggtggtcaatctgcagggcgacgagccattcgcgccggccgccgggatcgtc
gcggtggcgcaggcgctggccgacagcggcgcggagatggcgacgctgggcacgccggtg
gaatcggccgagagcctgttcgacccgaacgtggtcaagctggtgcgcagcgcgcagggc
gatgcgctgtatttcagccgcgcgccgatcccgtggcaccgcgacgcgttcgccgcctcg
cgcgaacggctgccgccgggtccgtggctgcgccacatcggcatctacgcctaccgcgcc
gggttcctgcgccgtttcgcggcgatgccgccggggcggctggaacaagtggaggcgctg
gagcagctgcgggtgctggaagccggtttccgtatcgcggtggcgctgtcgccggcgcca
ttcccgcccggggtggacacgcccgaggacctggcccgggccaaggcgcacctgcagggc
ctagatgtttga
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