Xanthomonas hyacinthi: FZ025_19140
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Entry
FZ025_19140 CDS
T06345
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy02020
Two-component system
xhy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FZ025_19140
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FZ025_19140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhy03021
]
FZ025_19140
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xhy02035
]
FZ025_19140
Transcription machinery [BR:
xhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FZ025_19140
Bacterial motility proteins [BR:
xhy02035
]
Flagellar system
Flagellar assembly proteins
Stator
FZ025_19140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QGY78647
LinkDB
All DBs
Position
complement(4347335..4348084)
Genome browser
AA seq
249 aa
AA seq
DB search
MNAAAHYRAVQRNSSNDYIAQHADLVRRIAHHLAARLPASVEIDDLIQAGMIGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAIRKIEQRTGRAAAAN
EVAAAMDMPLPEYLRLMEDAARGQVLSLESRVEDHGELDTIAKGGPNPQQMLERSEFGRE
LGKAIAQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQATVRLRGRLKAFEA
ADAGLEDEE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgcccactaccgcgccgtgcagcgcaacagttccaacgactacatcgcc
cagcatgcggacctggtgcggcgcatcgcccaccacctggcggcgcggctgccggccagc
gtcgagatcgacgacctgatccaggccggcatgatcggcttgatcgaggcctcgcgcagc
tacgacgccgaccagggcgcctcgttcgagacctacgcctcgatccgcatccgcggctcg
atgatcgacgagatccgccgcggcgactgggtgccgcgctcggtgcaccgccgcgcccgc
gacgccgccgcggcgatccgcaagatcgagcagcgcaccggccgcgccgccgccgccaac
gaagtggccgcggcgatggacatgccgcttcccgaatacctgcgcttgatggaagatgcc
gcgcgcggccaggtgctgagcctggagtcgcgggtcgaggaccacggcgagctggacacc
atcgccaagggcgggcccaatccgcagcagatgctggagcgcagcgagttcggccgcgaa
ctgggcaaggcgatcgcacagctgcccgagcgcgagcagctggtgctgtcgctgtactac
gaacaggaattgaacctgaaggaaatcggcgcggtgctcggtgtcagcgagtcgcgcgtc
tgccagatccacggccaggccacggtacgcttgcgcgggcgcttgaaagcgttcgaagcg
gccgacgccggcctggaagacgaagaataa
DBGET
integrated database retrieval system
