Xanthomonas hyacinthi: FZ025_20285
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Entry
FZ025_20285 CDS
T06345
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy02010
ABC transporters
xhy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FZ025_20285
03070 Bacterial secretion system
FZ025_20285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_20285
02044 Secretion system [BR:
xhy02044
]
FZ025_20285
Transporters [BR:
xhy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FZ025_20285
Secretion system [BR:
xhy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FZ025_20285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
DUF87
AAA_22
AAA_16
MeaB
AAA_18
NB-ARC
PRK
AAA_21
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QGY78852
LinkDB
All DBs
Position
4589098..4591278
Genome browser
AA seq
726 aa
AA seq
DB search
MAEGRPSLAVVELPMEGEAAPLPEDEDLGLAGLGLLAQFHGIAADAGQLAHQHGRAGEPF
DESTLLLAAKQLGLKAKFSDIAADRLDKVALPALAWQPDGEHFIVAKLGDQKVLIQDLRL
RRPQVLTRDQFDQHYAGWLLLVASRASVLGELARFDFRWFVPAVVKYRRILLEVFVVSLF
IQLFALVTPLFFQVVMDKVLVHHGMTTLEVIAAGLLAIAVFDVTLNGLRTYVFSHTTSKI
DVELGARLFRHILNLPLAYFESRRVGETIARVRELENIRTFLTGQALTSVLDLLFTGVFL
AVMFYYSGWLTLIVMLSLPVYALISAGITPILRKRLDDKFARGAENQSFLVETVSGIGTV
KATAVDPRMARTWDNQLAGYVGASFRVTRLANIGQQSVQLVQKLVGVGVLFFGAKLVIDG
KLSVGQLIAFNMLSGQVAAPIVRLAQLWQDFQQVGISVERLGDILNTRTEVPGSRMALPD
IRGRVTFEKVTFRYRPDAAEVLASIDLDIAQGEVIGIVGRSGSGKSTLTKLVQRLYVPER
GRVLIDGHDLTLADPAWLRRQLGVVLQENFLFNRSIRENIALSDPGMPLERVIQAAQLAG
AHEFILQLPEGYDTQVGDNGTGLSGGQRQRIAIARALVTNPRILIFDEATSALDYESEYA
VMQNMREICKGRTVLIIAHRLSTVRMANRIVVVEKGRIVESGTHAELVDGPSGQYAHLYA
LQQGMA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaggaaggccgagtcttgctgttgtcgagctgccgatggagggggaggcagcg
cccttgcctgaagacgaagaccttggcttggccggattggggctgttggcacagttccac
ggcatcgccgccgatgccgggcagctggcgcaccagcatggccgagcaggcgagccgttc
gacgagagcacgttgcttctggctgccaagcaactcggcctgaaggccaagttttcggat
atcgctgccgatcgcctggacaaggtggcattgccggccctggcctggcagccagatggc
gagcatttcatcgtcgccaagcttggggatcagaaggtgttgatccaggacctgaggcta
cgccggccgcaggtgctcacgcgcgatcagttcgatcagcactatgcgggctggctgctg
ttggtcgcttcccgggcttcggtgctgggcgagctggccaggttcgatttccgctggttt
gtcccggcagtggtgaagtaccggcgcatcctgctggaagtcttcgtcgtctcgctgttc
atccagctgttcgcgctggtcacaccgctgttcttccaggtcgtcatggacaaggtgctg
gtccaccacggcatgaccacgctggaggtcatcgcggccggcttgctggccatcgccgtg
ttcgacgtgaccctcaacggcctgcgcacctatgtgttctcgcataccaccagcaagatc
gacgtggaactgggcgcgcggctgttccggcacatcctcaacctgccgctggcctacttt
gaatcgcgccgggtcggcgagaccattgcccgcgtgcgcgaactggagaacatccgcacg
ttcctgaccgggcaggcgttgacctcggtgctggatctgctgttcaccggggtgttcctg
gcggtgatgttctactacagcggctggctgaccctgatcgtgatgctgtcgctgccggtc
tatgcgctgatctcggctggcatcaccccgatcctgcgcaagcgcctggacgacaagttc
gctcgcggcgcggaaaaccaatccttcctggtcgagaccgtcagcggcatcggcacggtc
aaggccaccgcggtcgatccacgcatggcccgcacctgggacaaccagttggccggctat
gtcggcgccagcttccgcgtcacccgcctggccaacatcggccagcaaagcgtgcaattg
gtgcagaagctggttggcgtcggcgtcctgttcttcggagccaagctggtcatcgacggc
aagctttcggttggccagttaattgcattcaacatgctgtccgggcaggtggccgcgccg
attgtgcgcttggcccagttgtggcaggacttccagcaggtcgggatctcggtcgagcgg
ctgggcgacatcctcaatacccgtaccgaggtgcccggcagccgtatggccctgccggac
atccggggccgcgtgacgttcgagaaggtcacgttccgctatcgccccgatgcggccgaa
gtccttgccagcatcgacctggatatcgcccagggcgaggtgatcggcatcgtcggccgt
tccggttcgggcaagagcaccctgaccaagctggtgcagcggctgtacgtgcccgagcgc
ggccgggtgctgatcgacggccacgacctgacgctggccgatccagcctggttgcgccgg
caactgggcgtggtgctgcaggaaaatttcctcttcaatcgcagcatccgcgaaaacatt
gcgcttagcgatcccggcatgccgctggagcgggtcatccaggcggcgcaactggctggc
gcgcatgagttcatcctgcaattgcccgagggctacgacacccaggtcggcgacaacggc
actggcctgtccggcgggcagcgccagcgcatcgccatcgcgagggcattggtgaccaac
ccgcgcatcctgatcttcgatgaagctaccagcgcgctggactatgagtccgagtacgca
gtgatgcagaacatgcgcgagatctgcaagggccgtacggtcctgatcatcgcccatcgc
ctgtccacggtacgcatggccaaccgcatcgtcgtggtcgagaaggggcgcatcgtcgaa
tccggcacccatgccgagctggtggacggacccagtggccagtacgcccacctgtacgcg
ctgcagcaggggatggcatga
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