Xanthomonas hyacinthi: FZ025_20940
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Entry
FZ025_20940 CDS
T06345
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FZ025_20940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhy03000
]
FZ025_20940
03400 DNA repair and recombination proteins [BR:
xhy03400
]
FZ025_20940
Enzymes [BR:
xhy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FZ025_20940
Transcription factors [BR:
xhy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FZ025_20940
DNA repair and recombination proteins [BR:
xhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FZ025_20940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QGY78961
LinkDB
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Position
4745828..4747303
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AA seq
491 aa
AA seq
DB search
MPQPTRDDHALYDRARLARDARFDGVFFTAVRSTGIYCRPVCPAPPPKRSNVHYYPSAAA
AAAAGYRPCLRCRPELSPEAQQHLGEESVRRALALIAEGALQEASVERLAADVGLSARQL
QRVFVGQLGATPAAVHATRRLLLAKQLLTDTALPITQVALAAGFNSLRRFNTAFLEGCGM
PPSAIRKQRAEVPGGDLLLRLGYRPPLDFPAMLGFLRKRAIPGIERIGDAGYARVLGPLA
ASTQIQVEADPQRHELRLRIAAADPRAIPDIVRRVRRIFDLDADLRAVHATLAAEPLLAR
AIARRPGLRVPGGWDGFEVAVRAVLGQQVSVAGAATLAARLVERHGGQRPGQPPGLDRAF
PTPQDLLDAPLEAIGLPRSRAATIRALAAAVVGGRLHFRAGQRLSEFVECATALPGIGAW
TAHYIALRALGQPDAFPAGDLVLQRMLGVDGARLSERATDARAQAWRPWRAYAVLHLWHL
AGDPPEEIPHD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcccacccgcgacgaccacgccctttacgaccgcgcccgcctggcccgcgac
gcgcgcttcgacggggtgttcttcaccgccgtgcgcagcaccggcatctattgccggccg
gtatgcccggcgccgccgcccaagcgcagcaacgtgcactactaccccagcgcggcggcg
gcggcggcggccggctaccgcccgtgcctgcgctgccggccggagctgtcgccggaagcg
caacagcacctgggcgaggaatcggtgcgccgcgcgctggcgctgatcgccgagggcgcg
ctgcaggaggccagcgtcgaacggcttgccgccgacgtcggactcagcgcgcgccagctg
cagcgcgtgttcgtcggccagctcggcgccaccccggcggcggtgcatgcgacgcggcgc
ctgctgctggccaagcagttgctgaccgacaccgcgctgccgatcacccaggtggcgctg
gcggccggcttcaacagcctgcgccgcttcaacaccgcgttcctggagggctgcggcatg
ccgccgtcggcgatccgcaaacagcgcgccgaggtgccgggcggcgacctgctgctgcgc
ctgggctaccgcccgccgctggatttcccggccatgctggggttcctgcgcaagcgcgcg
atccccggcatcgagcgcatcggcgacgccggctacgcgcgcgtgctcggcccgctcgcg
gcctcgacccaaatccaggtcgaggccgatccgcagcgtcacgaactgcgcctgcgcatc
gccgcggccgatccgcgcgcgatcccggacatcgtgcgccgggtgcgccgcatcttcgac
ctggacgccgacctgcgcgcggtgcacgccacgctggccgccgagccgctgctggcgcgc
gcgatcgcgcggcgcccggggctgcgcgtgcccggcggctgggacggcttcgaagtggcg
gtgcgcgcggtgctcggccagcaggtcagcgtggccggcgcggcgaccctggccgcgcgc
ctggtcgaacgccatggcgggcagcggcccggccagccgcccggcctggaccgcgcattc
ccgacgccgcaggatctgctggacgcgccgctggaagcgatcggcctgccgcgttcgcgc
gccgccacgatccgcgcgctggccgcggcggtggtcggcggacgcctgcatttccgcgcc
ggccagcgcttgtccgaattcgtcgaatgcgccaccgccctgcccggcatcggcgcctgg
accgcgcactacatcgccctgcgcgcgctcggccagcccgacgcgttcccggccggcgac
ctggtcctgcaacgcatgctcggcgtcgacggcgcgcgcctgagcgaacgcgccaccgac
gcccgcgcgcaggcctggcgaccatggcgcgcctatgcggtgctgcacctgtggcacctg
gccggcgatccacccgaggagattccccatgactga
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