KEGG   Xanthomonas hyacinthi: FZ025_21200
Entry
FZ025_21200       CDS       T06345                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xhy  Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xhy03400]
    FZ025_21200
Enzymes [BR:xhy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FZ025_21200
    5.6.2.6  RNA 3'-5' helicase
     FZ025_21200
DNA repair and recombination proteins [BR:xhy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FZ025_21200
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QGY79001
LinkDB
Position
4795524..4798067
AA seq 847 aa
MTPAQARKRPADAPLYAWFAAQGWQPLPFQRALWQHYLDGGSGLLHTPTGSGKTLAAFGG
PLLEGLREQAALQASARKAPRRSKAAANASASAPATRARRQAQRELKVLWITPLRALAAD
TLRALREPAQALGLDWQIGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYADTAPQ
LATLRCVIVDEWHELLGNKRGVLLQLCLARLRAWAPALRTWGLSATLGNLDEARDVLLPH
VPNAPIVAGVEPRTLTLETLAPASGERFPWAGHLGLAQLPRVLEKLFAVRTSLLFTNTRA
QAELWHQALESVWPEDAQSLALHHGSLDPALRRAAEHGLRDGSLRCVVATSSLDLGVDFP
AVDQVLQIGSPKGVARLLQRAGRARHHPGEAGHVLCVPSHALELVEYAAARRAIAHGRVE
SRPSPRLSLDVLAQHCVSCALGGGFRADALFAEVRGSAAFAALDAPTWAAVLDFVVQGGR
ALAQYPDYRKVVRDDDGVYRVHDRRIALRHRLSIGTITSDGSVAVRFLRGGRLGAVEEQF
VGRLRRGDRFQFAGRLLELVRLEDMTAYVRLAKGGDGSVPKWMGGRMPLSSALAHEVEAV
FAEPRGEEELRALAPLLGLQRALSALPSPQRLLVESVRARDGRHVFVYPFAGRQVHEGLA
ALLALRWGRRQRNTFSFAANDYGLVLSPAQEVVPDATLLRELLSPDHLFEDLRESLNLGE
LARRQFREIARVSGLLPPSLPGGTPRSLRQLQASSGLLYDVLRRFDPEHLLLAQAEREVL
QGEMELTRLAATLHDCAGRALALHTPRSLTPLSFPLWAESIRGQLSTEDWKARVMRAAAQ
LEQRHAR
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgacgccggcgcaggcgcgcaagcgcccggccgatgcgccgctgtacgcatggttcgcc
gcgcagggctggcagccgctgccgttccagcgcgcgctgtggcagcactatctggacggc
ggctcgggcctgctgcacacgcccaccggcagcggcaagaccctggccgcgttcggcggc
ccgctgctggaaggcctgcgcgaacaggccgcgctgcaggcatccgcgcgcaaggcgccg
cgccgcagcaaggccgctgccaacgcaagcgcgtcggcaccggccacacgcgcccgccga
caggcacagcgcgagctgaaagtgctgtggatcactccgctgcgcgcgctcgccgccgac
accttgcgcgcgttgcgcgaaccggcgcaggcgctgggcctggactggcagatcggcctg
cgcaccggcgacgccagcgcgcgcgacaagcgcctggcgcgcagcggcaagctcgacgtg
ctggtgaccacgcccgaatcgctggcgctgctgctgtcctatgcggacaccgcgccgcag
ctggcgacgctgcgctgcgtgatcgtcgacgaatggcacgagctgctcggcaacaagcgc
ggcgtgctgctgcagctgtgcctggcgcggctgcgcgcctgggcgccggcgctgcgcact
tgggggctgtcggccacgctcggcaacctggacgaggcgcgcgacgtgctgctgccgcat
gtaccgaacgcgccgatcgtggccggggtcgagccgcgcacgctgaccctggaaacgctg
gccccggccagcggcgagcgcttcccctgggccggccacctcggcctggcacaactgcca
cgggtgctggaaaaactgttcgcggtgcgcaccagcctgctgttcaccaatacccgcgcg
caggccgaactgtggcaccaggcgctggaatcggtgtggcccgaggacgcgcagagcctg
gccctgcaccacggctcgctggatccggcgctgcgccgcgccgccgaacacggcctgcgc
gacggcagcctgcgctgtgtggtggcgacctcgagcctggacctgggcgtggattttccc
gcggtcgaccaggtgctgcagatcggcagtccgaagggcgtggcacggctgctgcagcgc
gccggccgcgccaggcaccatcccggcgaggccggccacgtgctgtgcgtgccctcgcac
gcattggagctggtcgagtacgccgccgcgcgccgcgccatcgcccacggccgcgtcgaa
tcgcggccatcaccgcgcttgtcgctggacgtgctggcgcagcattgcgtgagctgcgcg
ctgggcggcggcttccgcgccgacgcgctgttcgccgaagtgcgcggcagcgccgcgttc
gccgcgctcgacgcgccgacctgggccgcggtgctggatttcgtcgtgcagggcggccgc
gcgctggcgcaatacccggactaccgcaaggtggtgcgcgacgacgacggcgtgtaccgc
gtgcacgaccgccgcatcgcgctgcgccaccgcctgtcgatcggcaccatcaccagcgac
ggcagcgtcgcggtgcggttcctgcgcggcggccggctcggcgcggtggaggagcagttc
gtcggccgcctgcgccgcggcgaccgcttccagttcgccgggcgcctgctggagctggtg
cggctggaagacatgaccgcctacgtgcgcctggccaagggcggcgacggcagcgtgccg
aaatggatgggcgggcgcatgccgctgtcctcggcgctggcccacgaagtggaggcggtg
ttcgccgagccgcgcggcgaggaggaactgcgcgcattggcgccgctgctcggcctgcag
cgcgccctgtcggcgctgccgtcgccgcagcggctgctggtggaaagcgtgcgcgcccgc
gacggccgccacgtgttcgtctatccgttcgccgggcgccaggtgcacgaaggcctggcc
gcgctgctggcgctgcgctggggccggcgccagcgcaatactttcagtttcgccgccaac
gattacgggctggtgctgtcgccggcgcaggaggtggtccccgacgcaacgctgctgcgc
gaactgctcagccccgaccacctgttcgaggacctgcgcgaaagcctcaacctcggcgaa
ctggcgcggcgccagttccgcgagatcgcgcgcgtgtccggactgctgccgccgagcctg
cccggcggcacgccgcgcagcctgcgccagctgcaggcctccagcggcctgctgtacgac
gtgctgcgccgcttcgatcccgagcatctgttgctggcgcaggccgagcgcgaagtgctg
cagggcgagatggaactgacccggctcgccgccaccctgcacgactgcgccgggcgcgcc
ttggccctgcacacgccgcgcagcctgaccccgctgtcgttcccgctgtgggccgagagc
atccgcggccagctcagcaccgaggactggaaggcgcgggtgatgcgcgccgccgcgcaa
ctggaacagcgccatgcgcgctga

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