Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00003
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Entry
AMD24_00003 CDS
T04108
Symbol
tmk
Name
(GenBank) Thymidylate kinase
KO
K00943
dTMP kinase [EC:
2.7.4.9
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00240
Pyrimidine metabolism
xii01100
Metabolic pathways
xii01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AMD24_00003 (tmk)
Enzymes [BR:
xii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.9 dTMP kinase
AMD24_00003 (tmk)
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GFIT
Motif
Pfam:
Thymidylate_kin
AAA_28
AAA_17
AAA_16
AAA_22
AAA
SRP54
AAA_18
Rad17
AAA_25
AAA_5
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALJ56207
UniProt:
A0A0P0G951
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Position
5949..6620
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AA seq
223 aa
AA seq
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MYSHCSAVRPRGIFISFEGPEGCGKTTQIQKLARVFQGCDRSFLVLREPGGTALGESVRH
LLKYATTAGPSNLSPEAELLLFAASRAQLVREKILPALLAGSFVVCDRFLDSTTVYQGTA
RNLPHNFVKYVNQQVVSGCIPDITFLLDIDSELALQRISRRGTHVLDRIEQESLQFHTLV
RKGYLELAQANPGRFIVLDAEQSADSLSKKIVMTLEERYGPFS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgcactgttctgctgtaaggccacggggcatttttatttcctttgaaggtcca
gaaggatgcggaaaaactacacaaatccaaaaactcgcgcgagtattccagggttgtgat
aggtccttcctagtactgcgagaaccaggaggaacagctcttggagaatctgttcgtcac
cttcttaagtatgccactactgctgggccctccaatctttctccagaagcagaactgcta
ctctttgccgctagcagagcacaactagttcgagagaaaattcttcctgctctccttgcg
ggctcctttgtcgtttgcgaccgcttcctcgattctactacagtctaccaaggcacagcg
cgcaacctgccgcacaactttgtcaaatacgtcaaccagcaagtggtaagtggttgtatc
ccagatattacctttctcctagacatagattccgagcttgcgctgcaacgtatatcccgg
cggggcacccacgttctagatagaatagaacaagaatccctgcagttccataccttagtt
cgtaaaggctacttggagcttgctcaggcaaatccaggccgttttatagttttagatgct
gagcagtctgcggattcactttctaaaaaaattgtgatgactttggaagaacgatatggc
cctttcagttaa
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