Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00088
Help
Entry
AMD24_00088 CDS
T04108
Symbol
mscK
Name
(GenBank) Mechanosensitive channel MscK precursor
KO
K05802
potassium-dependent mechanosensitive channel
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xii02000
]
AMD24_00088 (mscK)
Transporters [BR:
xii02000
]
Other transporters
Pores ion channels [TC:
1
]
AMD24_00088 (mscK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
ALJ56283
UniProt:
A0A0P0GFE5
LinkDB
All DBs
Position
complement(96930..99266)
Genome browser
AA seq
778 aa
AA seq
DB search
MVFPEKILGNVSMLRLLLLASLYVFPVPASALPEFPGLSGSLPSAASTSSEKTLTEQLQD
AKREIDEAQSTLTRMQGEETASALSDASLPSTLQLDLVTAAGNVLRNAQRYLENLETLHH
TQKNAEARQFLVKLGTEPGSSSTDVELIRERFYATQQALEAAQGEMQFLLDRTQQSVGHL
SKLDQTIRQFGPHPSRNNNWRRELVKLQKRGVELLVLADLARKNTLTLRIGALKQEATAD
KKLIQANITAIRPQQGKEALNQLEKERADINHYIQEAHKRDQSSQAALNKARENYLRIRS
DRISDSTEVISARQQYELAQAEIETVEEIIEDGRSYLHILDTETAYWKSLTKLGDKISTA
DAQREASALKPKLELIQKWKPHLEQEVRSKQLTIEGIKRHIDERRLKGSDREFLTKKLKL
FQEQNEMQQRLLWRVETLQWRLSDWLRQLQQMAPPLPLPTGFKEIWGALYATVAGTFNYE
VLHSRETKMVGGTQVVVEEHSVTVGHIIIALTLFLVGYSLLGKVAHSSVRAAQIRFQLPA
ARIALLEKLVLYPMILLLALCVLSWVRIPLTVFAYLGGALAIGVGFGAQNLINNFISGII
LLFERQVNVGDIVEVDAHTGAITALGSRCSRMRRGDGVEVLIPNSLLLEKNVVNWTLTEP
NHRFSFTFTVAYGVSVERVMQLVTQALNETPYLLKQPPHCVFFEQFGSDGLIFGVYYWVK
LGIEVDPRQPGSDLRLRIDQLFRTEGIQMPFAQRDIHLDSTSPVRVHIESSLQNHNLT
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtggtctttccagaaaaaattttaggaaatgtgtctatgttacgactactccttctcgcc
tccctgtatgtgtttcctgtacctgcatcagcacttccagaattcccaggcctttctggt
tctctcccatctgctgcttcgacatcatccgaaaaaactctcaccgaacaattgcaggac
gccaaacgggaaatcgatgaagcccaatctacgttgacacgcatgcagggtgaagagacg
gctagtgctctctccgacgcaagtcttccctcaacgttacaactagatcttgttactgcc
gctggaaatgttttgcgaaacgcacagcgttacttggaaaacctggagacgcttcatcat
actcaaaagaatgctgaagcacgtcaatttttggtaaagctaggtacagaacctgggtct
tctagcacagacgttgagttaattcgagagcgcttttatgctactcagcaagccctagag
gcagctcaaggtgaaatgcaattcttgttagatagaactcaacaatctgtgggtcacttg
tctaagttggaccaaacgatccggcaatttggccctcatcccagtagaaacaacaattgg
aggcgggaactagttaaattgcaaaaaaggggggtagagctattagttttggctgatctt
gccaggaaaaacactctgactttgcgaataggtgcactcaagcaagaggcaaccgccgat
aaaaagttgattcaagcaaatattactgccatccgtccccagcaagggaaagaagctcta
aatcagttagaaaaggagcgtgcagatatcaaccactacattcaggaagcgcataaacgc
gaccaatcttcacaagctgctttgaacaaagcgcgagaaaactatctcagaatccgatca
gatcgaatttccgacagcacagaagttatctcggcccgccaacaatatgagctcgcgcaa
gcagagatcgaaacagttgaggaaataatcgaggatggacgcagctaccttcacatatta
gacaccgagacggcttactggaagtccctcacaaaactgggcgataagatttctactgca
gatgcacagagggaagcttctgctctcaaaccaaagttggagctaatccaaaaatggaaa
ccacatctggagcaagaagtacgttccaagcagcttaccattgaaggcatcaaaaggcat
attgatgagcggagactaaaaggttcggaccgtgagtttcttactaaaaagcttaagttg
tttcaggaacaaaatgagatgcaacagcggcttctctggagggtagaaacccttcagtgg
agactttcagattggctacgccaactgcagcaaatggctccaccgctgccattgcctact
gggttcaaggaaatatggggtgccttgtatgcaacggttgctggtactttcaattacgag
gttttgcattccagagaaactaaaatggtcggcgggacccaggtagtcgtcgaagaacac
tccgttactgtgggacatattattatcgccctaaccctctttttagtaggttactccctt
ctgggaaaagttgctcactcctctgtaagggctgctcaaattcgctttcaacttcctgct
gcacgcatcgctttgttggagaaactcgtgctctatcctatgattcttctcctggccctt
tgcgtactaagctgggtcaggattcctcttacagtttttgcctacttgggcggagcgctt
gctatcggtgtaggctttggagcccagaatcttatcaataactttatcagtgggattatt
ttactttttgaacgtcaggtaaatgtaggtgacattgtggaagtagatgctcatacagga
gcaatcacagctcttggtagtcgctgctctcgcatgcgtcgcggagatggggtagaggtc
ttaatcccaaacagcctcttgctagaaaaaaatgtcgtcaattggacgctcacagagcct
aaccatcggttcagtttcacttttactgtggcctacggtgtttctgtagaaagagttatg
cagttggtcactcaggccctgaacgaaactccgtaccttctaaaacagccgccacattgc
gtgttttttgagcaatttggaagtgacggtcttatattcggcgtttactactgggtaaaa
ttaggcatcgaggtggatccacgacagccaggaagcgatcttcgcctccgaatcgaccaa
ctgtttcggacagaagggattcaaatgccttttgctcaacgggatatccacctagatagt
acttctccagtccgtgtgcatatcgagagtagtttacaaaatcacaatcttacttga
DBGET
integrated database retrieval system
