Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00120
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Entry
AMD24_00120 CDS
T04108
Symbol
lpd
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00010
Glycolysis / Gluconeogenesis
xii00020
Citrate cycle (TCA cycle)
xii00260
Glycine, serine and threonine metabolism
xii00280
Valine, leucine and isoleucine degradation
xii00310
Lysine degradation
xii00620
Pyruvate metabolism
xii00630
Glyoxylate and dicarboxylate metabolism
xii00640
Propanoate metabolism
xii00670
One carbon pool by folate
xii00785
Lipoic acid metabolism
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
xii01210
2-Oxocarboxylic acid metabolism
xii01240
Biosynthesis of cofactors
Module
xii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xii_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xii_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AMD24_00120 (lpd)
00020 Citrate cycle (TCA cycle)
AMD24_00120 (lpd)
00620 Pyruvate metabolism
AMD24_00120 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
AMD24_00120 (lpd)
00640 Propanoate metabolism
AMD24_00120 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMD24_00120 (lpd)
00280 Valine, leucine and isoleucine degradation
AMD24_00120 (lpd)
00310 Lysine degradation
AMD24_00120 (lpd)
00380 Tryptophan metabolism
AMD24_00120 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMD24_00120 (lpd)
00670 One carbon pool by folate
AMD24_00120 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xii04147
]
AMD24_00120 (lpd)
Enzymes [BR:
xii01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AMD24_00120 (lpd)
Exosome [BR:
xii04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AMD24_00120 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_oxidored
HI0933_like
FAD_binding_2
DAO
NAD_binding_8
AlaDh_PNT_C
Thi4
Lycopene_cycl
FAD_binding_3
2-Hacid_dh_C
NAD_binding_7
Lys_Orn_oxgnase
3HCDH_N
DNA_processg_A
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
ALJ56315
UniProt:
A0A0P0GHA0
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All DBs
Position
129385..130764
Genome browser
AA seq
459 aa
AA seq
DB search
MAYDLVVIGGGPAGYVAAIRAAKLGKKVACVEATRAGGTCLNWGCIPTKSLLRNAELYHI
VQRQGEEFGLKFDHLSFDWNRVIDRSRKVSDRLAGGIEQLFRKNNVDYILASGSIPQAHL
VEVVDQEDRRKVLETSKILLATGVVPREMVGLPFNDRTVVSSKQAMVLPQPPKEILIVGG
GAIGIEFAYFFNAFGAKVTVIEVMPNILHLEDTEVSEVLATSLAKQGIRLLTSTRVEKAE
IKGGSVYLTLLGKEGEMALQSPTVLVAIGVSPVLPSGVSFELDQRGYLKTDDYYATSVDG
VYGAGDIIGPPWLAHVASYEAIQAVNGMWGLSKPKKTSVFPSCVYCQPQVASVGMTERAV
KEKGLQYRVGKFPFYASGKALAVGESEGFVKLIFGEPYGELLGAHIIGSDATEIIAELGL
AITLEATFHDVIDTLHAHPTLSESIKEAAETAYGLATHI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcttacgatcttgttgttattggaggaggtccagctggctatgttgctgccatccgc
gctgctaagttggggaagaaggttgcctgcgttgaggcaacccgggcaggaggaacctgt
ttaaactggggctgcattccaacaaagtctctgctacgcaacgccgagctctaccacata
gtacaacgacaaggggaagagtttgggcttaaatttgatcatctttcctttgattggaac
agggttattgaccgtagcagaaaggtaagcgacagacttgcaggagggattgaacaacta
tttaggaagaataatgttgactacattcttgctagtggatctatccctcaggcgcacctc
gtggaggtagtagatcaggaagataggcgtaaagtgttagaaacctctaaaatccttctt
gccaccggggtcgttccacgcgaaatggtcggcctaccatttaacgacagaacggttgtc
agcagtaagcaagccatggttcttccacagcctccgaaggaaatcctcattgttggaggg
ggggccattggcattgagtttgcctacttctttaatgctttcggcgccaaggtaactgtt
atagaggtaatgccaaatattctccatctagaagatacagaagttagcgaagtactggca
acatctcttgctaaacagggtattcgccttttgactagcactagggtggaaaaagcggag
attaaaggtggaagtgtctacctcacccttttagggaaggagggcgagatggctctacag
tcacccaccgtattggtagcgattggcgtgtcccccgtcctgccgtctggcgtatcgttt
gaacttgatcaacgtggatacctcaaaaccgacgattactacgcaaccagtgtcgatggg
gtttatggtgctggggatattattggcccaccatggttggctcatgtagccagctatgag
gcaattcaggcggttaatggtatgtggggattatcaaaacccaaaaaaacttctgtcttc
ccaagctgtgtctactgtcagccccaagtggctagtgttggtatgaccgaaagggctgtt
aaagaaaagggactgcagtatcgggtgggaaagtttccattttatgccagtggaaaggca
ttagctgtcggagaaagtgagggatttgtaaaacttatttttggcgaaccctatggggaa
ctgttgggagctcatatcatcggtagtgatgctacggagatcattgcagaacttggcctc
gcaatcactcttgaagccacgtttcacgatgtgatcgatactcttcacgcacatcctacc
ttaagcgagtccattaaagaagctgcagaaacagcctatgggttagctactcacatctaa
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