KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00145
Entry
AMD24_00145       CDS       T04108                                 
Symbol
nusA
Name
(GenBank) Transcription termination/antitermination protein NusA
  KO
K02600  transcription termination/antitermination protein NusA
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:xii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xii03021]
    AMD24_00145 (nusA)
   03009 Ribosome biogenesis [BR:xii03009]
    AMD24_00145 (nusA)
Transcription machinery [BR:xii03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     AMD24_00145 (nusA)
Ribosome biogenesis [BR:xii03009]
 Prokaryotic type
  rRNA transcription factors
   AMD24_00145 (nusA)
SSDB
Motif
Pfam: NusA_N KH_5 S1 KH_NusA_C KH_KhpA-B MRP-S35
Other DBs
NCBI-ProteinID: ALJ56340
UniProt: A0A0P0GFJ2
LinkDB
Position
complement(158309..159601)
AA seq 430 aa
MNAELIATLDYLEREKGIRREVLVEAISSALLAASKRSFTAGTRNLRIEINPKNGNIRAM
AKLIVADPVRNSHDEIAISRARLLKLDVHLGEELDVEVTPRDFGRIAAQTARQAITQRLR
QLEKEMIYQEFKDRAGEIVSGTVRRFERSDVIVDLGRFEAVMPGWERVSTEEYSVGDRIR
AYVVAVENGSRGPEIILSRSHPNFVRRLFEIEVSEIADHTVELRGIAREAGYRTKVAVFS
SDEKVDPVGACVGMRGGRVKNIVRELNNEKVDIIRWHPDPKEFVKEALRPTVIKSIAMDE
AKKELRITVAKEGLSLAIGKRGQNARLTARLTGWDIDIQEDKSREEALESQKAQAAHSLA
ESLCLSEEDASFLASAGMNSVEVVAMSDAEDIAGILDGDMKRAAQILATAKSLQKDALQQ
QNAPIFSVGT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgaacgctgaattgattgcaactctggattatttagagagggagaagggaatccgtcgg
gaggtgctggtggaagctatttcgtctgctctccttgccgcgtcaaagcgcagttttacc
gctggcaccaggaatttgcgtatcgaaattaatccaaaaaatggtaatatacgtgcgatg
gccaagttaatcgttgcagatcctgtgcgtaactcccacgatgagattgccatttccagg
gcgcgccttttaaagctggatgtgcatctgggggaggaattagatgtcgaagtcactccc
agggatttcggacgcattgcagctcaaactgctcgccaagccatcacgcagcgtttgcga
cagcttgagaaagagatgatttatcaggagtttaaggaccgagcaggagagatcgtcagc
ggaactgttcgccgttttgagcgctctgatgtcatcgttgacctcggcagatttgaggct
gttatgccaggatgggagcgcgtctccactgaggaatatagcgtcggtgaccgcatccgt
gcttatgtcgtcgcggttgagaacggttcgcgcggccctgaaatcattctttcacgcagt
catccgaattttgttcgtaggttgtttgaaattgaggtaagtgagatcgcggatcacact
gtggagttgaggggtattgcccgtgaagctggctaccgtactaaggttgctgtgttcagc
tctgatgaaaaagttgatcctgtgggggcctgcgtaggtatgcgtgggggacgtgtcaag
aacattgtgcgtgaactgaataatgaaaaggtggatattattagatggcatcctgaccca
aaagaatttgtaaaagaggccctccgccctacggtgattaaaagtatagcgatggacgaa
gccaagaaggagttgcgaattaccgttgctaaagagggtctttctctggcaatcggcaag
agaggtcaaaatgctcgcctgaccgccaggctaacgggctgggacattgatatccaggaa
gataaatctagggaggaggcgctcgaatcccaaaaagcgcaggctgctcactccctggca
gaatctctctgtcttagcgaggaagacgcctctttccttgctagtgctggtatgaattca
gtagaagtggttgccatgtctgatgcagaagatatcgcaggcatcctggatggagatatg
aagcgtgctgctcaaattctagcaactgcaaaaagtctgcagaaagatgctttgcagcag
caaaatgcccctattttttcggttggaacctag

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