Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00157
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Entry
AMD24_00157 CDS
T04108
Symbol
rsmI
Name
(GenBank) Ribosomal RNA small subunit methyltransferase I
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xii03009
]
AMD24_00157 (rsmI)
Enzymes [BR:
xii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
AMD24_00157 (rsmI)
Ribosome biogenesis [BR:
xii03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AMD24_00157 (rsmI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ALJ56352
UniProt:
A0A0P0FN84
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Position
complement(172322..172993)
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AA seq
223 aa
AA seq
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MLTVIPTPIGNLEDITLRSVRAFLEADYIAAEDTRHTSILLQYLGVSKTLISFHRHNEAS
RTAQLITHIKAGYRVALSCDAGMPAISDPGYRLICACIQESLPFTVLPGPSAVLTALVGS
GLPCHEFYFAGFLPVKLGKRAAELRQAAIRPWTSIYFESPYRLVKSLAILTETHPSISVC
VAREISKKFEEYKRGTASEVLAYFTIHPPRGEIVLLICGTLPK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgcttactgttattcccacacctatcgggaatcttgaagatatcactcttcgctctgtt
agagcctttctggaggcggactacattgcagctgaggacacacggcacacctctattctc
ctacaatacctaggagtttccaagacgcttatcagttttcatagacataacgaggcttca
cgtactgcacagcttataacacatattaaggcagggtatagggtggcattgagttgcgac
gcaggtatgccagctatttcagatccaggctatcgcctgatatgcgcctgcattcaggag
agcttaccatttactgtgctccctggcccttcggcagtactgacagcattggtgggctct
ggacttccttgccatgaattctatttcgcagggtttctgccagtaaaactaggaaaacgt
gccgcagaactccgtcaagctgccatccgcccatggacttccatctactttgaatcccct
tatcgactggtgaagtcgcttgccattcttacagaaactcacccttctatctctgtgtgt
gttgccagggagatttccaaaaagttcgaagagtacaaacgcggaacagctagcgaggta
ctagcttattttacaatccatcccccgaggggagaaattgtccttttaatttgtggcacc
ctcccaaagtaa
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