Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00220
Help
Entry
AMD24_00220 CDS
T04108
Symbol
alr
Name
(GenBank) Alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00470
D-Amino acid metabolism
xii01100
Metabolic pathways
xii01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMD24_00220 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AMD24_00220 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xii01011
]
AMD24_00220 (alr)
Enzymes [BR:
xii01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
AMD24_00220 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
xii01011
]
Precursor biosynthesis
Racemase
AMD24_00220 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ALJ56408
UniProt:
A0A0P0GFP7
LinkDB
All DBs
Position
239419..240561
Genome browser
AA seq
380 aa
AA seq
DB search
MMIDIHPRAGMLRCWTEIQLDLLTLNLRELRSQLPCKCGVISVLKADAYGHGLVEVALAL
RSESTAFAVACLPEAIKLQTGIPDRDIIILGSTLPEERQRVVECGFIATVSSVEEVVGYA
KYARVRPARICIKIDTGMGRIGIWKEEAGRCLQALARIPGISVHSIATHLPVWEEDLVFS
WQQLQWMRNYSAFFRKLFPGAYLHVLSSTGILEFPSSAFDLVRPGLALYGIAIPRQHQHR
LKPVLAWKTRVVSVRQVEKGRSVGYGRTYITSKVSRLATLAVGYADGYPYSLSGSSASVL
IRGRHCPVVGRVTMDSTVVDVSELPDIHYGEEVVLIGRDREEEILASDMAGWASTIAWEI
LTRIHPGRMTRLFLGSSTIQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagacattcatccgagggcaggaatgttgcgctgctggacagaaatacaacta
gacttattgacgcttaatctaagagaactacgttcacaactaccctgcaaatgtggtgtt
attagtgtcttaaaggcagacgcttatggccacgggttagttgaagtcgccctggctcta
agaagtgagtctacagctttcgctgttgcctgtcttccagaggccatcaaacttcagacg
ggcattcctgaccgtgatatcatcatcctcgggtctactcttcccgaagagcgtcagcga
gtggtagaatgcgggtttatcgctactgtctcaagcgtggaagaagtagtaggatatgca
aaatatgctagagtgcgtcccgcgcgtatctgcataaaaatcgatactggtatggggagg
attgggatttggaaagaagaggcaggacgctgcctacaagcacttgcacggattcctggg
atatcggttcattccattgcgactcatcttccagtttgggaagaagacctggtgtttagc
tggcagcagctgcaatggatgaggaactatagtgctttttttcgaaaactctttccggga
gcctacttacatgtgctcagtagcacaggaattttggaatttccaagcagtgcattcgat
ttagtgcgacctgggttggctctctatggaattgccatacctcgtcagcatcaacaccgc
ctaaaacctgttctcgcatggaaaactcgcgtggtaagtgtgcgacaagttgaaaaagga
cgcagcgtcggttatgggagaacatacatcacttcaaaggtgtcgcgtctggccactcta
gctgtaggctacgccgatggttatccctattccctctctggaagttctgcttccgtgtta
atccgcgggcgccactgtcccgtagtaggacgcgtgactatggactccacggttgtggat
gtttctgagctacctgacatccactacggagaggaggtagttttaattgggagagatagg
gaggaagaaatcctcgcttccgatatggcaggttgggcgagtactattgcatgggagatc
ttaacccgtatacatcctgggaggatgacacgtttatttctcggcagttcaacaattcag
tag
DBGET
integrated database retrieval system
