Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00225
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Entry
AMD24_00225 CDS
T04108
Symbol
metG
Name
(GenBank) Methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00450
Selenocompound metabolism
xii00970
Aminoacyl-tRNA biosynthesis
xii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AMD24_00225 (metG)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD24_00225 (metG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xii01007
]
AMD24_00225 (metG)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00225 (metG)
Enzymes [BR:
xii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
AMD24_00225 (metG)
Amino acid related enzymes [BR:
xii01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AMD24_00225 (metG)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AMD24_00225 (metG)
Prokaryotic type
Other AARSs
AMD24_00225 (metG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
ALJ56413
UniProt:
A0A0P0G9N9
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All DBs
Position
245976..247514
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AA seq
512 aa
AA seq
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MSPKPFTLTAAIDYANADPHIGHAYEKILADVIARFQRLCGRGVFFMTGVDQHGQKVEQA
AARLGMDTQGFVDSVAARFRTLWETLGVAYDCWAATTHPLHQQIVCKVLRQLFSAGDLYK
STYRGFYSVRQEQFLTDKDRDATGKFGPEWGEIIFLEEGNWYFRLSKYLPWLSKFIETHS
EFVIPAFRRTEITHAIQHWKQDLCISRPRSRLSWGIELPFDQEFVTYVWFDALISYLSFT
GYLSEDPVEEGRFRQRWPALHILGKDIMIPAHAVYWPTMVHAMGFSDQQIPQLLVHGWWN
FDGTKVSKSTGNTVDPFILASRYGPAALRYYLMRDISTGRDANFSEERLILLCNTELANG
LGNLLNRTLSMVNLYLGGSLHPGFYSHDTNTIREQNRRSTSEYFLRMQSFEIDRAIMAIM
DIVSRSNAFIEASSPWELYRKPKQRAKLAEVLATLHESIRLAASLLAPILPKESAAMLNQ
LGIEAIDFSHPDPTLRTSLAVSPPQPVFPKFP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgagtccgaaaccatttactttaaccgctgctatcgactatgctaacgccgatccccac
attgggcatgcatacgaaaaaatccttgctgatgtaatcgctcgctttcaacgtttatgt
ggccgtggtgtattttttatgacgggggtggatcaacatggtcaaaaggtcgagcaggct
gccgcaagactggggatggatactcagggttttgttgactctgtcgctgctaggtttcgc
acgctctgggaaactctgggggttgcatacgattgctgggcagcaaccacccacccgttg
caccagcaaatagtctgcaaagtccttcgacagctctttagtgctggcgatctctataag
tctacctatcgcggtttttacagcgtaagacaggaacagttcctaactgataaagatcgg
gacgcaactggcaaatttggaccagagtggggggaaatcattttcttggaagaaggaaat
tggtatttccgccttagcaagtacttaccttggctttcgaaatttatagaaacccactcg
gaatttgtgatcccggcattccgccggacagaaattacccatgccattcagcactggaaa
caggatttatgcatatctaggccccgctctcgtctgtcatgggggattgaacttcctttt
gatcaagaattcgtaacctatgtttggtttgatgcactgattagctacctgagtttcact
ggctatctttctgaagatcctgtggaggaggggagatttcggcagcgctggcccgcacta
cacattcttggaaaggatattatgataccggcgcatgctgtttactggcctactatggtt
cacgccatgggattttctgatcaacaaatccctcaactgctcgttcacggttggtggaat
tttgacggaaccaaggtaagcaaaagtaccgggaacacggtagatcccttcatactcgca
tctcgatatgggccagcggcactgcgatactatcttatgcgggatatttccaccggccgg
gatgctaactttagtgaggagaggctaattctgctctgcaacacagagctggcaaacggt
ttggggaatcttctcaatagaacgttaagtatggtcaacctctaccttggaggctccctc
caccccggattctattcccatgacacaaacaccatacgtgaacagaatagacgctctaca
tctgagtactttcttcgaatgcaatcctttgagattgaccgcgcaattatggcaatcatg
gacatcgtatcccgctctaacgcattcatagaggctagctctccctgggagctttacagg
aaaccaaagcaaagagcaaaactagcggaggtactcgcaaccctccacgagagcatccgg
ctggcggctagcctacttgcacccatcctgccgaaagagtccgccgccatgctcaaccaa
ctagggatcgaagccattgacttctcccatccagatcccactctccgcacatcgctggca
gtgagcccaccacaaccggtctttccaaaattcccctag
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