KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00232
Entry
AMD24_00232       CDS       T04108                                 
Name
(GenBank) hypothetical protein
  KO
K03220  type III secretion protein D
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:xii00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xii02044]
    AMD24_00232
Secretion system [BR:xii02044]
 Type III secretion system
  Type III secretion core apparatus
   AMD24_00232
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd Y4YQ_C FHA
Other DBs
NCBI-ProteinID: ALJ56420
UniProt: A0A0P0GFQ3
LinkDB
Position
250361..251812
AA seq 483 aa
MPRVSPEGFEVGAGRFVVRVLNGPHEGAEMEIPRDGVTIGSGEECDLILFDTQVVPRHAQ
LTLGGQRVVLCPLQGAVWLDMVSIKDKVELLDGAKQIITVGNTHLAVGSLLPGEGEAWWP
AAGLSGGLPSGEESASSMVVQTAFPTEKSRRRNALLFIAVVGALLIFTTLEMSKHLGREK
VARVQEMDRPVFLGTVTPKSMPGHSGSVVVPHLPIPKPIDPSLFPLEAKVATQLSNEGVV
FSWKIQGSKPQLRIWARGGAESAVARRIISRFSPPLHYHIFDLSQVEASAAMLAQLSGLS
LRVRIEPEGVAFWSGYLQHEKMWHDFFLHIVRELPLIQNHRCKIVFGNQLVKILQKELRQ
HGLKVQPVASTGSVLLVGSLPKEQKEEWDSWMTKAYERYASRVSLIDRVNSSIVAGVASK
DFFPSRIVGVAGAEGPWVTLADGSKFFQGAKLKDGHVLEEITSSMLLLSGPEGALELHLS
TLD
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgcctagggtaagccccgaagggtttgaagtaggtgcaggtcggtttgtcgtgagagta
ctaaacggccctcacgagggtgctgaaatggaaattccgagggatggagttaccatcgga
agtggtgaagaatgtgatttgattctgtttgacactcaagtagttcccagacacgctcag
cttactctcggggggcagagggtggttttgtgcccgctgcaaggggcagtctggttggat
atggtctctatcaaagacaaggtggagctactcgacggtgccaagcagataattaccgta
gggaacacgcatttggcagtaggatctctcctgccaggagagggagaggcgtggtggcct
gctgctggcttaagcggtggacttccttccggggaggagagcgcttctagcatggtggtc
caaacggcctttccaacagaaaagagtaggaggcgtaacgctttgttgttcattgctgtg
gtaggtgcactgctcattttcactaccttggaaatgtcgaagcatctaggaagagaaaaa
gtggcaagggtgcaagaaatggacaggcctgtttttttaggaacagttactcctaaatca
atgccggggcactcaggctcagtggttgtccctcaccttcccattcccaagcctattgat
ccaagcttgttccccctggaggccaaagtagcgactcagctctctaatgaaggggtggtc
ttttcgtggaaaatacagggcagcaagccacaacttaggatatgggccagggggggggct
gaaagtgctgttgcacgcagaattataagtagattttcaccccccttgcattatcacatt
ttcgatctttcccaagtagaggcctcagcagctatgctggcgcaactttccggactatct
ctccgagtacgcatagagccagaaggggtcgccttctggagtggttatctacagcatgaa
aaaatgtggcacgacttcttcctacatatcgttcgtgagttaccccttatccaaaaccac
cgctgtaagattgtcttcggaaaccagttagttaagattctgcagaaagagttacgccaa
catggactgaaagtgcaacctgttgcatccacaggcagtgtgctcctggtcggaagctta
ccaaaagaacaaaaggaggaatgggactcttggatgaccaaagcatatgaaagatatgct
tcacgggtctctcttattgatagagtaaatagtagtatcgtggcgggagttgcctctaag
gatttttttccatcacgtattgtaggggttgctggcgcagaaggaccatgggttactctt
gcggatgggtcaaagttcttccaaggtgctaagctgaaagatggacatgttttggaagag
attacctctagtatgcttctgttgagtggtccagaaggtgcattagagctccatctttct
acgttggactag

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