KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00236
Entry
AMD24_00236       CDS       T04108                                 
Symbol
spiA
Name
(GenBank) Type III secretion system outer membrane protein SpiA precursor
  KO
K03219  type III secretion protein C
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xii00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMD24_00236 (spiA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xii02044]
    AMD24_00236 (spiA)
Secretion system [BR:xii02044]
 Type III secretion system
  Type III secretion core apparatus
   AMD24_00236 (spiA)
SSDB
Motif
Pfam: Secretin Secretin_N T3S_SPI-1_N0 Ssol_1539-like_2nd
Other DBs
NCBI-ProteinID: ALJ56424
LinkDB
Position
252764..254692
AA seq 642 aa
MELVAQGEIVFCEETLTLLRSLFRSALVLASAAGTGTPTTWSASSSRSTGSAPAAEIQSS
SESNPRNSNSGVHWLSGSINILADQSAIEDILREFGDQTNLRIVLSPAIHGKVSGKFMGL
GPKQFLQQICRAYGLDWLYYNKQIYFYSNTESKTAVCTLRYLPVVHAIRTVEQIEMLSLG
ASIHPIPNTPMVVLNGPPKYIEIAQAVLRTLEAQNAHRQTNELVIQVFPLNYAWAYDVEL
SNGVRVEGVATTLSKLILGGSHYGHTTTGEKFPVSLGTLGHVANPVLGVNDEWPRQRRVA
APRALFSLGGGQEGAKNAPIIPSAKSPAPNDVYNPASSPDSSPSIAASVRANAIVIRDVR
ENMPFYKAAIAKLDVPIRVIEISAAIVDVDIHASRALGLSGINASIGGVTGAASSTTGEP
IRHSGNLNIKGVFGTSVVTAALNFLERNKKAKILSRPTIVTLDNFGASIGSADTFYQSVQ
GNYVSNMFNVSADLRLEVVPHIMMHKKQPQIYMQVKVEDGSFDSKQKAASLPMVHRSQLV
TQSIVRKDQSLLIGGLYRKVDVRERSGYPWLNQVPILSFFFSSNTRRNLVVERLFLITPR
IVDINSRSLRDYSQYFHPHPATESTRRLSTRAPRKCNTVYVR
NT seq 1929 nt   +upstreamnt  +downstreamnt
atggagctggttgcacagggagagatagttttctgtgaggagactttgactctattacgt
tcactgtttagatccgctctggtcttagcgagcgctgcgggtactggaacgcctactact
tggtcggcatcctcctccaggtccactggatcggcaccggcagccgagattcagtcgtct
tccgaatctaacccacggaacagtaatagtggtgttcactggctatcaggctccatcaac
attttagctgatcaaagtgccatagaggatatcctgcgggaatttggggaccaaacaaat
ctcagaattgtccttagcccagccattcatggaaaagtcagcgggaagtttatgggctta
ggaccgaaacaattcctgcagcaaatctgccgtgcatacggattagattggctctactat
aacaagcagatctacttctattccaacacggagagcaaaacagcagtatgcactctaaga
tatttgcccgttgtacatgcaataaggacagtagaacagatcgagatgctctccttggga
gcctctatccaccctatccctaacactcctatggtagttctaaatggccctccaaaatat
atagaaattgcccaagcggtactccgcacgttggaggcgcagaacgctcatagacagaca
aatgaattggtgatccaagtattccctcttaactatgcctgggcttatgatgtagagctt
tctaacggtgtacgtgttgaaggagtcgctactactctctccaaacttatcttaggaggt
tcgcactatgggcatacaacgacaggagaaaaatttccagtttctttaggaactcttggg
catgttgccaatccagtccttggtgttaacgatgaatggccaagacaacggcgggtggca
gccccccgtgccctcttctctcttggaggagggcaggagggcgccaaaaatgctcctatt
atcccttcagctaaaagcccagcaccaaatgatgtctacaatccagcctcttcccccgac
agtagcccttccattgcggcaagtgtacgtgccaatgctattgtcattcgagatgttcgg
gagaacatgccgttttataaagcagccattgccaaattggatgttcctatacgggtaatt
gaaatttcagctgctattgtagacgtggacatccatgcctctcgggccttagggttaagt
ggtattaacgcaagcatagggggagtcactggggcagcaagtagcacaacaggagagcct
attagacatagcggtaatttgaatataaaaggcgtcttcggcactagcgttgttactgcg
gcgctgaactttctagaaagaaacaagaaggcaaaaattttgtcgcgccctactatagtt
acgctggataactttggcgcctccatcggaagtgcggacacattttaccaatccgtacag
ggcaactacgttagtaacatgtttaatgtgagtgccgacctaaggctagaagtggttcca
cacataatgatgcacaaaaaacagccgcaaatttatatgcaagtcaaagtagaagatggc
tccttcgactcaaaacaaaaggcagcctccttgcccatggtgcaccgctcccagcttgtt
acgcagtctatcgtccgcaaggatcaaagccttctcatcggagggttgtaccgcaaggta
gatgtacgggagcgcagcggatatccttggctgaatcaagttcccattctaagctttttc
ttctcctcaaatactcgtagaaacctggtagtagagcgattgtttcttattacaccgagg
atcgtcgatattaactccaggagtttgagagattacagccaatactttcatcctcatccc
gccacggagagtacgcggaggctctctacaagagcccctcgaaaatgcaacaccgtctac
gtacgctag

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