Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00262
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Entry
AMD24_00262 CDS
T04108
Symbol
mnmE
Name
(GenBank) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00262 (mnmE)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AMD24_00262 (mnmE)
Prokaryotic type
Methyltransferases
AMD24_00262 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_35
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ALJ56449
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Position
281934..283268
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AA seq
444 aa
AA seq
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MSESTETIVAISTPPGEGAVAMLRVSGPEAFVVAKRLFRSRVSFERMLPRHLYFGHIVEE
AVPVDEGLCAIFHAPASYTGENLVELSHHGGMMVAAQVLRLALDSGARLAHPGEFTQRAF
LNGKMDLTRAEAVMDLIRAQTLQAMRAAALQLDGSLSRAIETIRSELIHILSHIETSIDF
PEDGLEPDTGGTLLKRIFQVRQQIDTLLSTENQGRLLREGIRLTICGPPNAGKSSLLNQL
LKCDRAIVSQFPGTTRDTLEESASLKGMLFRITDTAGIHHTSDLIELEGIRRSFAAAERA
DVILYVVDAAQPQPLPPPAGLPEDRLHLVWNKIDLLREPFSYLPTSAAVSCRTGAGVPQL
ISRIVEWAGGLGHSSGQLVAINARHQSCLKRAVASLKHASDLANGVELVAFELQTALSAI
GEVTGAVDHEEILDSVFSNFCIGK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtctacagagactattgtggcgatttctaccccccccggtgaaggggcggtt
gccatgctgagagtctctggcccagaggcttttgttgttgcgaagagactttttcgttct
agagtttcctttgaaaggatgctgcctcgccatctctattttggtcatattgtggaagag
gcggtcccagtagacgaaggtttatgcgctattttccacgccccagctagttataccgga
gaaaatttggtagagttaagccaccacggagggatgatggtcgcagcacaagttcttcgg
cttgccctagattctggggcccgtctggctcatcccggcgaatttactcagcgggcattc
ctgaatggaaagatggatttaacgcgagctgaggcagtcatggaccttattcgagcacaa
actcttcaggctatgcgggctgcggctctgcaattagatgggagcctcagtcgtgcgata
gaaactattcgtagcgaattaattcatattctctctcatatagagacttctatcgatttt
cctgaggatgggcttgagcctgatacaggaggaactcttttgaagagaatttttcaggtc
cggcagcagatagatacgctcttatccacagaaaatcaggggcgcctacttcgggaaggc
attcggcttacgatctgtggacctcctaatgcagggaaatctagtcttctcaaccaactt
ttaaagtgtgaccgtgctatcgttagtcaatttccaggtactacgcgcgatacattagaa
gaaagcgcaagcctaaaaggaatgcttttccgcatcacggacactgcaggaatccatcat
actagcgatcttattgaactggagggaatacgtcgatccttcgcagctgctgaaagggcc
gacgtcattctttatgttgtcgatgctgcacagccacaacctcttccaccacctgctggc
ttaccagaggacaggctgcatctagtctggaataaaatcgacctgctgagagagcccttt
tcctatctaccgacgtcagcagcagtctcttgccgaacaggagctggtgttccacaacta
atctctagaattgtagagtgggcaggcggtctaggacatagcagcggacagttagttgct
atcaatgccagacaccagtcctgcctaaaacgcgctgtggcctctttgaagcatgctagt
gacttggccaatggagtggagcttgttgcctttgaactccagaccgcccttagtgctata
ggtgaagtgacgggtgctgtagaccatgaggagattctcgattcagtctttagtaatttc
tgcataggaaaataa
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