KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00278
Entry
AMD24_00278       CDS       T04108                                 
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:xii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xii03400]
    AMD24_00278 (polX)
DNA repair and recombination proteins [BR:xii03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    AMD24_00278 (polX)
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 HHH_5 PHP HHH_2 NTP_transf_2 HHH DNA_pol_B_palm CarbopepD_reg_2
Other DBs
NCBI-ProteinID: ALJ56464
UniProt: A0A0P0FIT4
LinkDB
Position
298157..299914
AA seq 585 aa
MPSKSLTNKDYCRILNDIALLLELKGEKNPFKIRAYLRASKMLSMVPWKLAEATSEQVKA
IEGIGKSIAEKISELTQTGHLKFYEELCGELPQDILTLLSIPGLGVRKVKVLYEGLGVTS
ITSLEKVCREGKLISLPGFGRKTSKNLLRSLEDKRRNAGKFLLVQVLPLAVGLVEELKRL
SEVSLVAYAGSIRRGKDIVHDIDLVVAGKASRGILSSFLLHPWVESVLAKGVTKCTVRLR
TGIPCDLRVVTEKEYPFALAYFTGSREHNIRLRSLALKNGWSLNEYGFTPAEKRVRKQAV
PSVDDEAGIYQALGLQFIPPELREDHGEFAAAAAKNIPPLVKMEDLKGTFHCHTTDSDGY
DSLERVAEAGMKLGFQYLGISDHSKSLVQANGLNERALMEQCKTISQLNATYERFHLFSG
IECDILKDGRLDFSDEVLASLDYTIASVHTSFSLSAAAMTRRIIRALSNPYVTVLGHLTG
RLLLRRLPYQVDIPAVIEAAASAGTWIELNANPNRLDMEYSWWPLAREKKVKCVINPDAH
SARDIQDVSFGVCSARRGGLTPRDVMNCLTSSEIAIALQAKRVKV
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgccttctaaatcactaactaataaagattattgccgtatacttaatgatattgcactt
cttctagaacttaagggagagaagaaccccttcaagataagagcttatttgcgtgcctct
aagatgttatctatggttccttggaagcttgctgaggctactagcgaacaggtaaaggcg
attgaaggaataggaaaatccattgccgaaaaaatatctgagctcacacaaacgggtcat
cttaagttctacgaagagctgtgcggggaacttcctcaggatatccttacactccttagc
attcctggacttggtgttagaaaggtcaaagttctctatgagggattgggagtaacttcc
attacttctttagagaaagtgtgccgagagggaaagctcatatctcttcccgggtttgga
agaaaaacttccaaaaatctgttgcgatccttggaggacaagcgtcggaatgctgggaaa
tttttattagtgcaggtgttacccttggctgtgggattggttgaggaattaaagagattg
agtgaagtttcactggttgcctatgcaggaagcatacgccgaggtaaggatattgttcat
gacattgatcttgtagtggctggaaaagccagcagggggatcctgtcttctttcttactt
catccatgggtggagagcgtcttagctaagggggttaccaagtgtaccgttcgactcagg
acgggtattccttgcgacttacgtgtggtgacggaaaaagaatatccgtttgctctagcc
tattttacaggcagtagggagcacaacataagattacgctcgctagccttgaagaatggg
tggtctctcaacgaatatggttttacccctgcagagaaacgcgtccggaaacaagcagtc
cctagtgtggatgatgaggcgggcatttatcaagctttaggcctacagtttattccgcca
gaattaagagaagatcacggagaatttgctgccgcagcagcaaagaacatccctccctta
gtgaaaatggaagacctcaagggaaccttccattgtcacactactgatagcgacggatac
gactctctagaaagagtggccgaagcaggcatgaagcttggctttcagtatctgggaatt
tctgatcacagtaaaagcttagtgcaagcaaatggcctcaacgagagggcccttatggag
cagtgtaagacaatctcacagctgaatgctacctatgagaggtttcatcttttttctggg
atagagtgcgatatcctgaaagacggcaggcttgatttttcagatgaagtgctcgcatcc
ttagattacaccatagcctctgtccacacttccttctcattatcagcggcagcaatgacg
cgccgtataatccgagcgctgtctaacccatatgtcactgtactcggccatttgaccggt
cgtctgctcctcaggagattgccttaccaagttgacatcccggcggtaattgaagctgca
gcatcggcgggcacatggatcgagctcaacgccaatccaaaccgtctagatatggagtat
agctggtggccacttgctcgcgagaaaaaggtgaagtgcgtaatcaatccagatgctcac
tcagcgagagatatccaagatgtgtcttttggagtttgtagcgctcgcagaggagggctc
actccacgagatgtgatgaattgcctaacatcttccgagatagcgatcgccctccaagct
aagcgagtaaaagtttag

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