Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00317
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Entry
AMD24_00317 CDS
T04108
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00317 (cca)
Enzymes [BR:
xii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
AMD24_00317 (cca)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
AMD24_00317 (cca)
Prokaryotic type
AMD24_00317 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ALJ56500
UniProt:
A0A0P0GFW8
LinkDB
All DBs
Position
332110..333480
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AA seq
456 aa
AA seq
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MSTPEYSQHLRQLAIRIVSRLRHAGHTALFAGGCVRDQLLRIPPHDYDVATDARPDQVQS
LFEKTLPIGAQFGVVLVVEQGSPFQVATFRAEGSYVDHRHPREISFGTPEQDAFRRDFTV
NGLFEDPFEGCILDYVGGREDLEKGIIRCIGNATDRFEEDRLRVMRAIRLASTLDFQIHS
NTWKALTICASNLNEISAERIREELNRILLSPRRMQGFDLLDKSGVLSFLLPEVEALKGC
KQPPEFHPEGDVFIHTRLMLALLHAQVPLHLALATLFHDIGKPGTMQEDQAGRIRFNTHE
KLSAEMAYKIMKRLRYSNTEIEVTQTLIRNHMAFKDVQNMRPSTLKRFLARHSFKDELEL
HRIDCLSSHGSLSNYEFLIAKCAEFSHAPLAPTALISGKDLLALDWKPGPQFRIALEAAY
NAQLEGLLSSKEEAITFLLEKFSDLGSDKTSSRGKI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcccgagtattcgcaacaccttcggcaactcgccatccggattgtttctaga
ctccgacacgccggccacacagccctctttgcaggaggatgcgtacgcgatcaactcctc
agaatcccaccacacgactacgatgtcgctactgatgcccgtcctgatcaagtacaatct
ctctttgagaaaacactacccataggcgctcaatttggagtcgtgctagtcgtcgaacag
ggtagtccgtttcaggtagctacctttcgcgcagaagggagttatgtagatcatcgccat
cccagagaaatttcctttgggactcctgagcaagatgctttccggagagatttcactgta
aatgggcttttcgaggacccttttgagggttgtatccttgactatgttggaggacgggag
gacctagagaaggggataattcgttgcattgggaatgcaacagaccgttttgaggaggac
cgcttacgcgttatgcgtgctatacgtctcgcgtcaactttagacttccagattcattca
aacacgtggaaagcattaaccatctgtgcttccaatctcaatgagattagcgctgaacgc
atccgtgaagagcttaaccggattctgctttccccaagacgaatgcaaggcttcgatctg
ttagacaaaagtggcgtgcttagttttctactccctgaagtagaagctctaaaaggctgc
aaacagcccccagagttccacccagaaggagatgtttttatccatacgcgcttaatgctc
gccttgctccacgcacaagtgccactccatttagccttagccacccttttccatgatatc
ggaaagcctggtactatgcaagaggaccaagctgggcgcatacgctttaacactcatgag
aaactcagtgctgaaatggcctacaaaatcatgaaacgcttgcgctactctaatacagaa
attgaggtcactcaaactctcattcgcaatcatatggcttttaaagatgtgcaaaacatg
cgtccttctacactgaaacgcttccttgcgcgacacagcttcaaagatgagttagaactc
caccgcatagattgtttgagcagtcatggctcgctcagcaactacgaattccttatcgcg
aagtgcgcagagttctcccatgcgcctcttgcacccactgcattgatcagtggtaaggac
ctcctcgctcttgactggaagcctggtcctcaatttagaatagcactagaggctgcctat
aatgctcaacttgaaggtcttctttcttccaaagaagaagctatcacctttcttttggaa
aaattttccgatttgggaagcgataagacatcgtcccgaggaaaaatataa
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