KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00321
Entry
AMD24_00321       CDS       T04108                                 
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00020  Citrate cycle (TCA cycle)
xii00640  Propanoate metabolism
xii00660  C5-Branched dibasic acid metabolism
xii00720  Other carbon fixation pathways
xii01100  Metabolic pathways
xii01110  Biosynthesis of secondary metabolites
xii01120  Microbial metabolism in diverse environments
xii01200  Carbon metabolism
Module
xii_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xii_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:xii00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AMD24_00321 (sucD)
   00640 Propanoate metabolism
    AMD24_00321 (sucD)
   00660 C5-Branched dibasic acid metabolism
    AMD24_00321 (sucD)
  09102 Energy metabolism
   00720 Other carbon fixation pathways
    AMD24_00321 (sucD)
Enzymes [BR:xii01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     AMD24_00321 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 Ribul_P_3_epim
Other DBs
NCBI-ProteinID: ALJ56503
UniProt: A0A0P0FYU9
LinkDB
Position
complement(335989..336870)
AA seq 293 aa
MAILINKNTRLLVQGITGKSGSFHARGCMEYGTNVVAGVTPGHGGETFDSKVPIFDTVEE
ARKNTGCDATMIFVPGPFAADAVLEAAASGVRLIVCITEGIPVMDMVRVMAILKDKECRL
VGPNCPGIITPGQCKIGIMPGYIHKPGSIGIISRSGTLTYEAVWQLTGRGYGQSTCIGIG
GDPIQGTSHLEALKMLHDDPETQGIVLVGEIGGTAEEEAATWAKEHGEKPLAAFVSGATA
PAGRRMGHAGAIISRGRGTAQSKIEALEQAGFHIARSPADIAEALIQALKANK
NT seq 882 nt   +upstreamnt  +downstreamnt
gtggcaatcttgattaacaagaatactcgcctgctggtgcaggggatcacagggaagtct
ggttcctttcacgcgcgtggttgcatggaatatggaaccaatgtcgtggctggggtgact
ccagggcatggaggagaaacttttgattctaaagtgccgatatttgatactgtagaggag
gcgcggaagaatactggatgtgacgccacaatgatctttgtaccgggcccatttgctgct
gatgcagtgctggaggcggctgcatcaggcgtgaggcttattgtctgtattactgaaggt
attcctgttatggatatggtacgagtaatggcaatattgaaggataaagagtgtcggtta
gtcgggcctaactgcccaggcattataacgcctgggcagtgtaagatcggcattatgcct
ggctatatccacaaaccaggctccattggaattatctctcgctccgggactcttacttac
gaggctgtctggcaattaacaggacgtggctatggacagagcacgtgtattggcatcggg
ggcgatcctatccaggggacttcacacctagaggctctcaagatgctgcacgatgaccca
gagacacaaggaattgttctcgttggagaaattgggggtacagcagaggaggaagccgct
acttgggcaaaagaacatggtgaaaaacctctcgctgcctttgtttccggtgcaaccgca
ccagctgggcgacgcatgggacatgccggagccattatttccagaggaagggggactgca
cagagtaagatagaggccctagaacaggctggtttccacatagctagatcacctgcggat
attgcagaagctctgattcaggccttaaaagctaataagtag

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