Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00421
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Entry
AMD24_00421 CDS
T04108
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00421 (truA)
Enzymes [BR:
xii01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AMD24_00421 (truA)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMD24_00421 (truA)
Prokaryotic type
AMD24_00421 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALJ56596
UniProt:
A0A0P0GA53
LinkDB
All DBs
Position
455192..455956
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AA seq
254 aa
AA seq
DB search
MRLRLIISYDGAPFLGWQSQLKGDTVQGVVERAFFKIVGRRVIVHGASRTDAGVHALAQC
AHADIPDGRMDLSDWRRALNANLPGAVRILKVLQTASSFHARFASIGKIYRYRIWNSEVL
PPLERGRVWHVPNFLDFGALRSNVTLFEGRHNFVSFAVNGSNNTDNTVRTLRTVQISRCS
GGEVRLTFEGEGFLYKMIRVLTGTLVRLGQKKEDIGWVSRLLLGSSVKRRKSLCIAPAQG
LYLVRVLYGRKPKC
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcggttaaggttaattatcagttacgatggagcgccgtttcttggatggcaaagccaa
ctaaaaggggacacggtccagggtgttgtcgaaagggcgtttttcaagatcgttggcagg
cgtgttatcgttcacggagctagtagaacagatgctggcgtacatgccttggcacaatgc
gctcacgcagatataccggatgggcggatggatctttctgactggcgtcgggcgctaaat
gccaatcttccgggggcagttcggattttgaaagtgttacagactgcttccagctttcat
gcgcgctttgcttccattggcaagatctatcgataccgtatttggaactcggaagtgctc
ccccccctagagcgtggccgtgtttggcatgtacccaactttcttgatttcggggcatta
cgttctaatgtaaccctcttcgagggtcgacacaattttgtatccttcgcggttaatgga
agcaacaacacagacaatactgtacgtacactgcgcaccgtgcaaattagccgttgttct
gggggggaagttcggctgacctttgagggagagggatttctctacaaaatgattcgtgta
ctcactgggactctcgtacggcttggacagaaaaaagaggatattggttgggtttctagg
ctactgctaggttcttcggtgaaaagaaggaaaagtctatgcatagctccagcacaaggg
ctataccttgtccgagtcctttatggaaggaaaccgaaatgctga
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