Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00425
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Entry
AMD24_00425 CDS
T04108
Symbol
yidC
Name
(GenBank) Membrane protein insertase YidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii02024
Quorum sensing
xii03060
Protein export
xii03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AMD24_00425 (yidC)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AMD24_00425 (yidC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD24_00425 (yidC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xii03029
]
AMD24_00425 (yidC)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
xii02044
]
AMD24_00425 (yidC)
Mitochondrial biogenesis [BR:
xii03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
AMD24_00425 (yidC)
Secretion system [BR:
xii02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AMD24_00425 (yidC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
60KD_IMP
YidC_periplas
Motif
Other DBs
NCBI-ProteinID:
ALJ56600
UniProt:
A0A0P0GHY7
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Position
458672..460363
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AA seq
563 aa
AA seq
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MDRKSWIGLILSITGLIAWEWFYLKNFAPGQDYSKSPSQATSAPSFSVPSSPRLPPSPLP
IISETAMLRNSTADYWFTGFFGGISKIVVQKHLGDDRTPILLSSDSRLPIGALWVTPTTL
MEGFAMTTDRATHSVTFTKASENGIQITKRFFLLPDKDRSNQYRIRLEVSFCNPTSSDIY
WPSYWISVGNAAPIHSSDLPSYTQLSWSNGGRLTSINVDWFDGSKIPLLGIERRTPAKLY
QRRVPSVKWASVSNQYFCTFLMVSDSSGDGVWASRIPLRGDSQSYGIEGRIELPGFRLAS
GKTRVQSFTIYSGPKELNRLQVMGDGQEGILQYGLFGFVSERLLWIMNWFYGVFGNYAWA
IIALTLLIKLGLWPLQNRATRAMRQMSLLAPKVTELREKYKDDSQKTNEEMMKLYREYGV
NPFGGCLPMLVQIPIFFGFYTMLGTSIELRNSSFLWIRDLSQPDTVLHLLGFPINLLPIL
MAGTMIWQMAISPKSGDVLQQKIFYFMPLIFLAFCYNYASGLALYWTTQNVFSIVQLYLT
RNSPLPQLERKVAITRKKEHFGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaaatcttggatcgggcttattttgtccattaccggtctaattgcctgggag
tggttctatcttaagaactttgctcccggacaagactactcgaaaagtccttcccaggca
acttctgccccctccttttcagtcccatcttctccacgcctccccccttctcccttaccg
attatctccgagactgctatgctacgtaattctacagcagattattggtttaccggcttt
tttggagggatttccaaaattgtcgtccaaaagcacttaggagatgatcgtacgccaatt
ttgctcagtagtgattctagactccctatcggggccctctgggtaacccctaccaccctc
atggaggggtttgcaatgacaactgatagggccacgcactctgtaacttttactaaagcc
tctgaaaacggtatacaaatcactaagcgtttttttcttcttcccgataaagaccgatcc
aatcaatacagaatccggcttgaggtttccttttgcaatcccacttcttccgatatctac
tggccatcctattggattagcgttgggaatgcggctcccattcattccagcgatctcccg
agttatacccaactcagttggtcaaatggcggtagattaacttccattaatgtagactgg
ttcgatggctccaaaattccgcttctcgggatcgaaaggcgtacgcctgctaagctctac
cagcgtagagttccctccgttaagtgggcttccgtgagcaaccagtacttttgtactttt
cttatggtgtctgattcatcaggagacggtgtgtgggcgagtcggatacccttgcgtggt
gattcgcagtcatatggaattgagggaaggatagagctacccggatttcggttggcatct
ggaaagaccagggtgcaatccttcactatctactctggccctaaggaattgaaccgcctg
caggtcatgggtgatggacaagaaggtatcttgcaatacggtctattcggatttgtcagc
gagcggttgctctggataatgaactggttctacggtgtgttcggaaactatgcgtgggct
attattgcgctaacattgttaataaaactaggcctttggcctttgcagaacagggctaca
cgagctatgcggcagatgtctctgcttgcacccaaggtcaccgaattacgagaaaaatat
aaggacgattcccaaaagacgaatgaggaaatgatgaaactgtaccgtgaatacggcgta
aatccttttggcggttgtcttcctatgttggtacaaattccaattttcttcgggttttac
actatgctgggtacttctattgaattgcgaaatagctcattcctttggattcgtgatctt
tctcaaccagacactgtgttgcatttgctaggatttccgatcaatctgttgcctattctg
atggcaggtacaatgatatggcaaatggctatctctccaaagagtggcgatgtgctgcaa
cagaagatcttctactttatgccacttattttccttgcattttgttacaactacgccagt
gggctagcgctttattggactactcagaacgttttctccatagtccagctctatctgact
aggaatagtccgttgcctcagcttgaaaggaaggtggcgataacacggaagaaggaacat
tttggtaagtag
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