Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00461
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Entry
AMD24_00461 CDS
T04108
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xii03009
]
AMD24_00461 (rsmE)
Enzymes [BR:
xii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
AMD24_00461 (rsmE)
Ribosome biogenesis [BR:
xii03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AMD24_00461 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ALJ56634
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All DBs
Position
501790..502554
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AA seq
254 aa
AA seq
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MHRFFLPPEIFRHSPPSLTGLEAHHCLNTLRLPVGEHVTVFNGRGSEAKVTISCIKKDKV
LLSSLTRLSFTPRPPVEITLAQAIPKARSMGWIIQKAVELGAARVAPLISERTVVQIDSR
EGKRKQSRWERIAIRACEQCGRNWLPHILQPSSLEEFLQSIGTKDFLLIASLQPDACRLK
EVLASYLQKYGKPRHATILVGPEGDFTLGEIALAKGEGCQPVTLGPIVLRTETAAIYCLS
VLSHELGLCSPYNE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttcttcctgcctcccgaaatttttcggcactcccctccctcccttactggg
ctagaagcccatcactgtctcaatacattgagacttccggtgggggagcacgttactgta
tttaacggacgtggaagtgaggcaaaagtaaccatttcttgcatcaaaaaagataaggtg
ttactgagttctcttacacgccttagctttacacctcgccctcctgtagaaattaccctt
gcgcaggcaatccccaaggcaaggagcatgggttggattattcaaaaagcagtagagttg
ggtgctgctcgtgttgctcccttgatctccgaaagaactgtggttcagatagattccaga
gaagggaaaagaaaacagtctagatgggagagaatcgccatcagggcatgcgagcagtgc
ggtcggaattggctcccacatattttgcagccaagttctctcgaggaattccttcagtcc
ataggcacgaaggatttccttttgattgcttcccttcaaccggatgcttgcagactcaaa
gaggttcttgctagctacctccagaaatatggtaagccgaggcatgctacgattcttgta
ggccctgagggggattttacactgggagaaatagctctggccaagggtgaaggatgccaa
cctgttacgctaggtcctattgtgttgagaactgaaaccgctgcgatatactgcctgagc
gttctttcgcacgagctgggtctgtgctcaccttacaatgaataa
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