Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00474
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Entry
AMD24_00474 CDS
T04108
Symbol
ppdK
Name
(GenBank) Pyruvate, phosphate dikinase
KO
K01006
pyruvate, orthophosphate dikinase [EC:
2.7.9.1
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00010
Glycolysis / Gluconeogenesis
xii00620
Pyruvate metabolism
xii00710
Carbon fixation by Calvin cycle
xii00720
Other carbon fixation pathways
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AMD24_00474 (ppdK)
00620 Pyruvate metabolism
AMD24_00474 (ppdK)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AMD24_00474 (ppdK)
00720 Other carbon fixation pathways
AMD24_00474 (ppdK)
Enzymes [BR:
xii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.1 pyruvate, phosphate dikinase
AMD24_00474 (ppdK)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP-utilizers_C
PPDK_N
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
ALJ56646
UniProt:
A0A0P0GI23
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All DBs
Position
511120..513972
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AA seq
950 aa
AA seq
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MSKKTVTKNSAESFFTRADGERKLRAERLLVGKATPLPTGPTVSLRTSSKLGGRKYVFSF
GDGKADGNGSLRASLGGKGANLAEMTRIGLPVPPGFTISTEVCTYYYKHGYVYPRALESQ
LRAALSKTEKSVGKRLGDAESPLLLSVRSGARDSMPGMMDTILNLGINDETVEVIAAKTG
SPRFAWDAYRRFLQMYGDVVMGVQRHMGEHHDPFEEVINALKQEVGIEKDDEFSVRDLKK
LVASFKALIEERSGKSFPQEPLEQLWGAISAVFRSWQNDRATVYRRKYGIPHEWGTAVNV
QAMVFGNMGETSATGVVFTRNPATGEEAFYGEYLINAQGEDVVAGVRTPQPVSQLQKEMP
TTYRQLLAVRHILEKHFRDMQDLEFTIEENRLYILQTRSGKRTGTAAVRIAAEMVKERLI
TKEEALLRIPADSLSHVLAPIFDPASKEKAQLIATGLPAGPGAASGHIFFQAEDAVTFSQ
KGEKALLVRVETSPEDLRGMIAAEGILTARGGVSSHAALVARQMGKVCVCGACMLRIDYR
TKTIATGKITLREGDFISIDGTTGEVFAGEVRTSPSEVVQVLVNRTLEPSRSKIYKNFAL
LMGWANKYSKLRIRANADTPEQVANAIAFGAQGVGLCRTEHMFFEGNRIDAMREMVLAAS
PEERRTALEKLLPYQREDFVGIFRALRGLPATIRLLDPPLHEFLPHDSLQQKSLADSLNI
PVETLIKRVQELHEFNPMLGLRGCRLGMVYPEISEMQACAVFEAAALVQKEGIKVHLEIM
VPLVGFSKEFKIQKDLVQQVAKDVARRLQTKFNYLIGTMIEVPRAALIASAIAGEADFFS
FGTNDLTQTSLGMSRDDAGSFLPAYMEREILPGNPFASIDQEGVGRLMEIAIEGARRTHP
GIKLGVCGEHGGDPNSVRYCYHLGLTYVSCSPFRVPIARIAAAQAALGAR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaaaacagtcactaagaacagcgcggagtccttttttaccagagccgatgga
gagaggaagttgcgtgcagaaagattactcgttgggaaggcaacgccgttgcctaccggg
ccaacagtttcacttcgtacttcaagcaaactaggggggaggaagtacgttttttccttt
ggggacggcaaagcagatggtaacggtagcctccgtgcttcactaggtggaaagggggca
aatcttgcggagatgacgagaattggacttcctgtcccacccggttttaccatttcgact
gaggtctgtacctattactacaagcacggatacgtgtacccaagagctctagaaagtcag
cttcgagcagcactgtcaaaaaccgaaaaatcggttgggaagaggttaggcgacgcagaa
agcccgctacttctctctgtccgctccggcgctcgagattcgatgccaggtatgatggat
accatcctcaaccttggaataaatgatgagactgtggaggttatagctgctaagactggt
agccctcgatttgcgtgggacgcttaccgccgttttctccagatgtatggagatgtagtc
atgggtgtacagcgccatatgggcgaacaccatgatccttttgaggaggtaatcaatgca
ctcaaacaagaagttgggatcgaaaaagatgacgagttctctgtaagggatctcaaaaag
ctggtagcttctttcaaggctttaattgaggaacggagtggaaaaagtttcccacaagag
cccttggaacaactttggggggccattagcgcagtttttcgttcttggcaaaacgatcgt
gcgactgtctaccgccgaaaatatggtattccccatgaatggggtacggcagtgaatgtg
caggccatggtgtttggcaacatgggagaaactagcgccaccggggttgtctttactcgt
aatcccgctactggagaagaggccttctacggagagtatctcatcaacgcgcagggagaa
gatgtagtggccggggtgcgcaccccgcaaccagtgtctcagttgcagaaggaaatgcca
accacttatcgtcaactactggctgtacgccatattctggagaagcactttagggatatg
caagacttggagtttaccattgaagagaatcggctttatatcctccaaacgcgcagcgga
aaaaggactgggaccgctgcagtaaggattgcggcggaaatggtgaaagaacgcttaatc
accaaagaagaagctctcctgcgtattcctgctgactcgctgagtcatgtgcttgctccc
atctttgatccagcctctaaggagaaagctcaattaattgctacagggctccctgcagga
ccaggcgccgccagtggccatatcttcttccaggcagaagatgcagtcactttttctcag
aaaggagaaaaagctcttctggttcgtgtagaaacctctcctgaggatctaaggggcatg
attgcagcagaaggcattcttactgccagaggtggagtatcctcacacgcggccttggta
gcacgccaaatgggcaaagtctgcgtttgcggcgcctgcatgcttcgcattgattaccgc
acgaagactatcgctacaggaaagatcaccttaagggaaggtgattttatttctatcgac
ggaacaaccggggaggtttttgccggtgaagttaggacctctccttccgaggtagttcaa
gtactcgtcaataggacgctggaaccttctcgttccaaaatctacaaaaactttgctctc
cttatgggttgggcaaacaaatacagcaagctgcgcatccgtgcgaatgcagatactcct
gaacaagtagccaatgccattgcatttggagcccaaggcgtgggtttgtgccgtactgag
cacatgttcttcgaagggaaccgaattgatgccatgcgagagatggttcttgctgctagc
ccggaagagcgccgtactgctttggaaaaactgctaccctatcagagggaggactttgtt
ggtattttccgtgcgctaagaggtttgccagctaccattcgtttattagatcctcctctt
catgaatttcttccgcatgactctttgcaacagaagagcctagcggacagtctgaatatc
ccagtggagacgctcataaagcgcgttcaggagttgcatgagtttaatcctatgctgggg
ctgcgtgggtgtcgcctaggtatggtgtatccagaaatttctgagatgcaggcatgcgct
gtgttcgaagcggcagcgttggtacagaaggagggtattaaggtacacttggaaatcatg
gttccattagttggattctccaaggaatttaaaatacagaaagaccttgtgcagcaagta
gccaaggatgttgccaggagacttcaaacgaagtttaattatctcattggaacaatgatt
gaagttcccagagcagcgttgatagccagtgcaattgcaggagaggctgacttctttagc
tttggtacgaatgatcttacccagacaagccttggtatgagccgagatgatgctggctct
ttcctgccggcttacatggaaagggaaatcctgcctgggaacccttttgctagcatcgat
caagagggggtcgggcgccttatggaaatagccattgaaggggctcgcagaacacatcct
ggcattaagctcggtgtttgtggtgaacatggaggagacccaaacagcgtgagatactgt
tatcatctaggactcacttatgtaagctgtagtccattccgcgttccaattgccaggatt
gctgcagcccaagccgctttgggagcaagataa
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