Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00503
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Entry
AMD24_00503 CDS
T04108
Symbol
rplE
Name
(GenBank) 50S ribosomal protein L5
KO
K02931
large subunit ribosomal protein L5
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AMD24_00503 (rplE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xii03011
]
AMD24_00503 (rplE)
Ribosome [BR:
xii03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
AMD24_00503 (rplE)
Bacteria
AMD24_00503 (rplE)
Archaea
AMD24_00503 (rplE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L5_C
Ribosomal_L5
Motif
Other DBs
NCBI-ProteinID:
ALJ56675
UniProt:
A0A0P0FZ97
LinkDB
All DBs
Position
532144..532692
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AA seq
182 aa
AA seq
DB search
MQAKLQEEYRRRIIPVLLERYRYRNVHQVPRIEKVVINTCVASASSIKEALEVAQADLGL
ITGQKPIVTLSKKNVSNFKLRKHQEIGSKVTLRGRIMYEFLERFIFAALPRIRDFRGVSA
KAFDGHGNYTIGISDQSIFPEVELDKVKYTIGFDITIVTTASTNEEARSLLAEVGMPFSD
KK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctaagctacaagaagagtacagaaggcgcataattccggttctcctagagagg
tacaggtacaggaacgtccaccaggtccccagaattgagaaggtagtcatcaacacctgc
gtggcctcggcctctagtataaaggaggccctagaagttgcccaggctgatctaggccta
atcaccggacagaagcctatagtaactctttccaagaaaaatgtctctaatttcaaattg
cgaaaacaccaagaaattggctccaaggtgacactccgtgggcgcatcatgtacgagttc
ttggagcgttttatcttcgcagccttgccaagaatacgtgacttccgtggagtttctgct
aaggctttcgatggccatggaaattacacaatagggatcagtgatcagtcgatttttccc
gaggttgagcttgataaagtcaagtacactattggctttgacatcaccatcgtaactact
gctagcactaatgaggaagcaaggtcactcctagccgaggttggtatgccattttcagat
aagaagtaa
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