Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00507
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Entry
AMD24_00507 CDS
T04108
Symbol
rpsE
Name
(GenBank) 30S ribosomal protein S5
KO
K02988
small subunit ribosomal protein S5
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AMD24_00507 (rpsE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xii03011
]
AMD24_00507 (rpsE)
Ribosome [BR:
xii03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AMD24_00507 (rpsE)
Bacteria
AMD24_00507 (rpsE)
Archaea
AMD24_00507 (rpsE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S5_C
Ribosomal_S5
Motif
Other DBs
NCBI-ProteinID:
ALJ56679
UniProt:
A0A0P0G814
LinkDB
All DBs
Position
534208..534780
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AA seq
190 aa
AA seq
DB search
MLTPKNSKERRNTSRPPRGANRQAADSKNTLTDKVVFINRCAKVVKGGRRFSFSALIVSG
DRQGRVGVGFGKANEVSEAIRKATVAAHKCLLNVAITANTLPHEVVGEFGGGRVLLRPAS
PGTGVIAGGGVRAMMEVVGIRDVLAKSLGSSNPTNVVKATLNALTTLRKREQVDQVRGKT
TPFQGFLAAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgctaactcccaagaatagtaaagaaagaaggaatacctctcggcctccacgaggagcc
aacaggcaagctgccgattccaaaaataccctcactgacaaagttgttttcatcaaccga
tgtgccaaggtggtcaagggtggacgccgtttcagttttagcgcgctaattgtctcaggc
gaccgccaaggacgggttggagttggttttggaaaggcaaatgaggtgagtgaggctatc
cggaaggcgacagtagcagcgcacaaatgcctgcttaatgttgctattactgcaaatacg
cttccccatgaggtggttggggagtttggtggggggcgtgtcctactacggcctgcttct
cctggaacaggagtaattgctggcggcggcgtacgcgctatgatggaagttgtcggtatt
cgagatgtcctggccaagtctcttggatctagcaatcctaccaatgtggttaaggcgacc
ctgaatgctctaactaccctccgaaagcgtgagcaggttgatcaagttcgtgggaaaact
actccattccaaggcttccttgcagccggctga
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