Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00516
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Entry
AMD24_00516 CDS
T04108
Symbol
fabF
Name
(GenBank) 3-oxoacyl-[acyl-carrier-protein] synthase 2
KO
K09458
3-oxoacyl-[acyl-carrier-protein] synthase II [EC:
2.3.1.179
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00061
Fatty acid biosynthesis
xii00780
Biotin metabolism
xii01100
Metabolic pathways
xii01212
Fatty acid metabolism
xii01240
Biosynthesis of cofactors
Module
xii_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMD24_00516 (fabF)
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
AMD24_00516 (fabF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xii01004
]
AMD24_00516 (fabF)
Enzymes [BR:
xii01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.179 beta-ketoacyl-[acyl-carrier-protein] synthase II
AMD24_00516 (fabF)
Lipid biosynthesis proteins [BR:
xii01004
]
Fatty acid synthase
Component type
AMD24_00516 (fabF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
ALJ56688
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Position
complement(541715..543043)
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AA seq
442 aa
AA seq
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MSDRRVVVTGLGVITPLGNDVKTFWKNLIEGRSGVRLYQAFDSEIYSCKIAGEVRSFDPV
GVFKEANKFHHSAEQDLCTSTRSFEEVAKAKALKEARRSDRFTQFAVAAATMALSDSGLD
IKTIQRDRFGVLIGSGIGGLQSMEDETKRLYARGPSRVSPFTIAMMISNMASGVVSMEFG
ICGPNMSIVTACATANHSIGEAWRIIKFGDADVFLAGGAEATITPLGISGFSAMNALSLR
NDEPERASRPFDRDRDGFVMGEGAGILLIEELEHAKRRGASIYCELSGYGLSSDAYHMTQ
PLPEGEGAARCMKMAMQHAGVNSGEIDYINAHGTSTPIGDICETKAIKLALGSSAKTTMV
SSTKSMTGHLLGAAGGVEMAACVLAIKYGIVPPTINLEHQDPECDLDYVPNQAREQRVCI
AINNSFGFGGHNATLLARRFPG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgtagggtcgtcgtaacaggtctaggcgttataactccgcttggtaacgac
gtaaaaacattttggaaaaacctaattgaaggccgaagtggtgtcagactttatcaggca
ttcgactcagagatctactcctgcaaaattgcaggggaggtccggagttttgatcctgtt
ggtgtttttaaagaggcaaataaattccatcattctgctgagcaggatctttgcaccagc
accagatcttttgaggaggtcgcaaaagccaaagcgctcaaggaagctaggcgctcagac
cgatttactcagtttgccgtagctgccgccaccatggccttgtcggactcaggattagat
atcaagaccattcaacgtgatcgcttcggcgtcctgattggaagtggcataggaggcttg
caaagcatggaggatgaaacaaagcgtctgtatgcacgcggaccatcccgtgtttccccc
tttacaattgctatgatgattagcaatatggcaagcggtgtggtttcaatggaatttggc
atctgtgggcccaacatgtccattgtgactgcctgtgcaactgctaatcattctattggg
gaagcctggcgtatcattaagtttggagatgctgatgtttttctggctggtggtgccgag
gctactattacccctttgggcatatcagggttttcagccatgaatgcgctaagtctgaga
aatgatgaaccagagcgagcctctcgtccatttgatcgtgatcgcgacgggtttgttatg
ggtgagggggctgggatactgcttattgaagaactagaacacgctaaacgccgaggagca
tctatttactgcgagctttctggatatggcttaagtagtgatgcctatcacatgacgcag
cctctcccggagggtgagggagctgcgcgctgtatgaaaatggccatgcaacatgccggt
gtaaattctggagaaatcgattatattaatgcgcatgggacttctacgcccattggtgat
atttgcgagactaaggcaatcaagcttgcgttaggcagtagtgctaaaactactatggta
agctcgacgaagtctatgactggccatctacttggagcagccggaggggtggaaatggct
gcctgtgtcttggcgattaaatatggaatcgtgcctccaacgatcaaccttgagcaccaa
gatccagaatgtgatcttgactatgtacctaaccaggctcgtgagcaaagggtgtgtatt
gctattaacaactcgtttggatttggtggtcataatgccactcttcttgcacgcagattc
ccaggttaa
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