Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00547
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Entry
AMD24_00547 CDS
T04108
Symbol
mdtB
Name
(GenBank) Multidrug resistance protein MdtB
KO
K07788
multidrug efflux pump
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMD24_00547 (mdtB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xii02000
]
AMD24_00547 (mdtB)
Transporters [BR:
xii02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AMD24_00547 (mdtB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
ALJ56716
UniProt:
A0A0P0FJ43
LinkDB
All DBs
Position
575114..578251
Genome browser
AA seq
1045 aa
AA seq
DB search
MKNISEPFIKRPIATSLLMMAISLAGLISYRLLPVSALPSVDFPTIQVTSRYPGADAQAM
ASLVTAPLEKRLGQISGVASMGSTSSMGTSVITLQFVLGKNMDQSAQDVQTAISAAGGVL
PKDMPSPPIYNKVNPADMPILTLAITSDNLPLAKVNDYADSILAQRLSEISGVGLITIQG
NQKPAVRVQLNPSALAARGISLEDVRKIITRANTNSPKGSLEGARQSLTIGANDQIRNAS
ELAPLLLSHQGGASVCLQDVAAIEDGVENSLTQAWIANSQRPYQRAVLLDIQRQPGANII
RTADRVKSILPQITRSLPPGVHLSVFSDRTETIRASMQDVQFTLLLTVSLVILVLSLFLR
KVGLTLIPTVTLPISMLGTLVFLYFAGFSLDNLSLMALTISAGFVVDDAIVVIENIVRYI
EQGEPPITATLKGTRQIGFTVISLSISLIAVFIPLLLMPGIVGRLFREFAITLSCAIAIS
ALISLTLTPTMCSRMLGAPDVYSKKGVSRAQHCFDFFFSRLLQFYRHSLNWILERQRITL
LVTAVTTFATVILFSLIPKGFLPLQDTGLLIGVTDASQDVSFSRMVRLQRQISQHLSQDP
DVLRVAAFVGTSTVNPTQNMGRFYIVLKPRKDRASAQEIILRLSKTAQRVPSIRLHLQAV
QDLQIDTHISRTQFQYTLEDVHSTTLQEWVPKLLDKLKAEPSLTDVATDQQHHGLQLRIA
IDRTTASRLNIPIQTIGDTLYDAFGQRQISVIYTDLNQYRIVMENEKGFRNSPRSLEKLY
VNPTMGGSLVPIGSLARANVQPAPLIISHYGQFPSATISFNLHPRFSLGEAIHSVERVGV
SIGMPKSIQTHFVGSVAEFHFALKKEFFLILSALVTVYIVLGILYESYFHPITILSTLPS
AGIGAILALLLCRLELSLVALVGVFLLIGIVKKNAIMMVDFALDARREEHLSARDAIYQA
SLLRFRPIMMTTATALLGAVPMALGSGLGSELRRPLGVAVIGGLLLSQLITLYTTPVVYL
YLDRLEQCIKRWRKRVTASSAPAAI
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatatttcagagccgtttattaaacgccctatcgctacttccttgctcatgatg
gctatttccctcgcaggcttgatcagttatcggttgcttccggtctctgcattgccatcg
gtagatttcccgacaattcaggtgacatccagatatcctggagcagatgcccaagcaatg
gcatcattggtaacggctcccttagaaaagaggttagggcagattagtggagtggcctcc
atgggatctactagctccatgggcacttcagtaattacactgcagtttgtcttaggaaag
aatatggaccagtctgctcaagatgtgcagacagctattagtgcagctggtggcgtccta
cccaaggatatgccgagtccccccatctataataaagtaaacccagcagacatgcccatt
ctgactctcgccattacctcagataatttgccattggcgaaagttaatgactatgcagat
tctattctggcacaaagactcagcgaaatctctggagtcggattaataactattcaaggc
aaccagaaaccggctgtacgagtccaattgaacccgtccgctcttgctgcaaggggaatc
agtctagaggatgtacgcaagataattacacgtgccaacactaactcccccaagggaagc
cttgaaggagcccggcagtcattgactataggggctaatgaccaaattcgaaacgctagt
gagcttgcccctttgcttctatcccatcagggtggagcgtccgtatgtttacaggatgtg
gcagcgatagaagatggggtcgaaaattcattgacgcaggcctggattgctaactcccag
cggccataccaacgggctgtcctcctagacatccaaaggcagccgggcgccaatattatc
cgcacagccgaccgggtcaaatctattcttccacagattactcgttctttgccgccggga
gtacatctttctgttttttcagaccgtactgaaacaattcgagcatctatgcaggacgta
caatttaccctcttgctgacagtatctttggttatactggtgttgtcactctttctaaga
aaagtgggtcttacgctcattccgaccgtaactctgccaatttctatgttaggtaccctc
gtctttctctattttgctgggttcagtttggacaacctttctctgatggcactgaccatc
tctgccggatttgtagtagacgatgctattgtggtgattgagaatattgtccgctacata
gaacagggggagccgccgataacggccactttaaaagggactcgacaaattggctttacc
gttatttcgcttagcatctcactcatagcagtgtttattcccttattgctcatgcctgga
atagttgggcgcctcttcagggaattcgccattacgctgagttgtgccattgcaatttct
gctctgatatctctgactctgacccctacaatgtgttccaggatgctgggtgcaccagat
gtgtactcgaagaaaggagtatccagggcccagcattgcttcgacttttttttcagcagg
cttctccagttctatcgtcattccctaaactggatattagaacgccaacgaataaccctt
ctggttacagcggtcaccaccttcgctacagtaatcttgttctcgttaattccaaaggga
tttttaccacttcaggatactgggttattgattggtgtaacagatgcctctcaggacgtt
tccttcagcaggatggtgaggttacagaggcaaatctcacaacacctctcccaggatccg
gacgtgttgagggtagcggcttttgtcggcactagtacagttaatcccacccaaaatatg
gggagattttatatcgtactgaaacctcgtaaagatcgtgcaagcgcgcaggaaatcata
cttcgcctctcaaagactgcccaacgagtgccaagcatccgcctacacctacaggcggtg
caggatttacagatagatacgcatatcagccgtacgcagtttcaatacacactggaagat
gtacactctaccacccttcaagaatgggtgccaaaactgctcgataagttaaaagccgaa
cctagccttaccgatgtagctaccgatcaacaacatcacggactccagctccgtattgcg
atcgaccgcacaactgcctctcggctcaatatccctatccagactattggcgatacgctt
tatgacgcgtttggacaacgccagatatcagtaatctataccgaccttaaccagtaccgc
atcgtcatggaaaatgagaaaggttttagaaactcaccgcgttccttagagaaactctac
gtaaaccctaccatgggtggtagcctagttcccataggatctctagcgcgagcaaacgtt
cagccggctccgctgataatttctcattatgggcaatttccgtcagcgacaatttccttc
aatctacatcccagattttctcttggcgaggccatacattctgttgagcgcgtgggagta
tctatcggcatgccaaaaagcattcaaactcattttgtaggcagtgtcgcagaattccac
ttcgccctcaaaaaggaattcttccttattctctcggccctcgtgacagtttatatcgtt
ctgggaatactctatgagagctacttccaccccattaccattttatccactctgcccagc
gccggaataggagctatactcgctcttctgctctgtagactggaactttctctagttgcc
cttgtcggtgtttttctcctaatcggtattgtgaaaaagaatgcaattatgatggttgat
tttgctctggatgcaaggcgcgaggaacacctttcggcaagagatgcaatttatcaggca
tccctcttacgattccggcccattatgatgacgacagctaccgcgttgttaggagccgtt
ccaatggctttagggtctgggctaggatctgagttgcgcaggccgctaggggtagcagtt
attggcggattgttactttctcagcttattactctctacactacaccggtggtgtatctc
taccttgataggttagagcaatgtataaagcggtggagaaagagagtaactgctagtagt
gcccctgcggcaatatga
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integrated database retrieval system
