Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00563
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Entry
AMD24_00563 CDS
T04108
Symbol
cysS
Name
(GenBank) Cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD24_00563 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xii01007
]
AMD24_00563 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00563 (cysS)
Enzymes [BR:
xii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
AMD24_00563 (cysS)
Amino acid related enzymes [BR:
xii01007
]
Aminoacyl-tRNA synthetase
Class I (G)
AMD24_00563 (cysS)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AMD24_00563 (cysS)
Prokaryotic type
AMD24_00563 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
DALR_2
tRNA-synt_1f
tRNA-synt_1
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
ALJ56732
LinkDB
All DBs
Position
592254..593669
Genome browser
AA seq
471 aa
AA seq
DB search
MLSFFNTLTRRVEEFSPLDPEGQTVLLYTCGPTVYSLAHIGNFRAYIFEDLLQRHLEFRG
FNVRRVMNLTDVEDKTIRGCCEAGIPLADFTRPFKEAFFQDLSTLRIKKAESYPEASAPV
HIGRMIEMIATLISKGHAYQARDSSVYFRLSTFPAYGQLAHFHLNELRPSGRIKSDEYGK
ESVGDFALWKAWDEKDKAVGWESPWGKGRPGWHIECSAMATGTLGPSIDIHCGGEDNIFP
HHEAEIAQSECATGRPFVRLWMHCRHLLVNGQKMSKSKGNFLTLRDLLHQGWTGREVRYV
LASTRYREPLNFTFESLLGARSALQRLDEWTKRLHSRTSRVSLQPIAPPQLDTAAFGRAL
DNDLNTSAALGNVFEIVRDSNRLLDQEKLSPSNITFLNSWIRQVHSVFHLELNYRRPDLP
RKVSSLLFQREQARAKKQWGTSDSLREEILALGWKIKDTRGGQEVSGNSLN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttaagctttttcaacaccctcacccgcagggtggaagagttctcccccttagaccct
gaggggcaaaccgttctgctctatacctgcggtccaacagtatatagcctggctcatatt
ggaaattttcgcgcctatatttttgaggaccttctacagcgccatctagaatttcgcggg
tttaacgtgcggcgcgtgatgaacttaacggatgtagaggacaaaactattcgtggctgt
tgcgaggcaggcatccctcttgcagattttactcgtccttttaaggaggcatttttccag
gatttaagtacgctccgtataaagaaggctgaatcctatccagaagcgagtgcacctgtt
catatcggacgtatgattgaaatgatcgccactctcattagtaaaggccatgcgtatcaa
gctagggacagttccgtatatttccgtttatcgacatttcctgcctatgggcagcttgct
cattttcatctcaatgagctgcggccttccgggcgcataaagagcgatgaatatgggaaa
gaaagtgtaggagatttcgctctttggaaggcatgggatgagaaggataaagccgttggt
tgggaaagtccatgggggaaggggcgacccggatggcacattgaatgtagtgctatggct
acaggtactcttggaccaagcatcgacatccattgtggtggagaagataacatttttccc
catcacgaggcagaaattgctcagtcagagtgtgcgactggaagaccctttgttagacta
tggatgcattgccgacacctcctagtcaacggacaaaaaatgtctaaatctaagggtaat
ttcctaacccttcgcgatcttctccatcaaggatggacaggaagagaagttcggtatgta
cttgccagtactcgctatagagagcctctgaattttacctttgagagcctattaggggct
agaagcgctctgcagcgtttggatgaatggaccaagcgcttgcacagcagaaccagtaga
gtttcattgcagcctatagcacctccacaactggatactgcggcatttggaagagcattg
gacaacgatcttaacacttcggccgcactgggtaacgtctttgagattgtacgagattcc
aaccgcctcttagaccaagagaaactctcaccgtccaatattacttttttaaatagctgg
attaggcaagtgcattccgtgttccatctagagctaaattaccggcggccagacctgcct
agaaaggtaagttctcttcttttccaaagagaacaggcgcgagctaagaaacagtggggc
accagcgatagtttacgtgaggaaattctcgctttgggatggaagataaaagacactagg
ggaggccaggaggtaagtggtaattcgttgaattag
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