Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00608
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Entry
AMD24_00608 CDS
T04108
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii02010
ABC transporters
xii02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMD24_00608
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD24_00608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xii02000
]
AMD24_00608
Transporters [BR:
xii02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AMD24_00608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ALJ56775
LinkDB
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Position
643363..644616
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AA seq
417 aa
AA seq
DB search
MSQMISLRNLTLVLSAVLVLSIFSFQALQRGRDRQVGNMQEPIRIGVFQSLTGAEASFGQ
EVMKGIEMAMKEINAQGGVLVKWNKKNSLRCPLEIIVRDNQSKPGETSAIARELISRYRV
VALIGEVSSGRTLEAAPIAQRYHVPLLANSASNDRVTKIGNYVFRISYRDSQQGEVLARY
IYLLGKRKAALLVDSSRDNSATMADSFKKQFIALGGDIVERQSYNAHDKDFQAQVTTIKN
SGADCLFLPGVYTECATIMKQARSLGLNLSTFGGDSWDSPVFVNVAGKAAEGAVFTNSFS
ADDPDPTVQSFVQSYRSKYGQHAKPMALAVTGFDALKLMVNAIERAKVDGPDVNLKDPGR
LKRFRHAIRDALAKTCNYGAVSGSITFDKNGDPAKAMVLLRVCHGRFEFIRKEPPPQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatgatttctctaaggaacttgactcttgtattatccgctgttcttgtcctt
tcaatattttccttccaggccctccagagagggagagacagacaagttggcaatatgcaa
gaaccaattcgcattggggtgttccagtcgcttactggggcagaagctagttttggtcag
gaagtgatgaagggaatcgagatggccatgaaagaaatcaatgctcagggaggggtattg
gtgaaatggaacaagaaaaattccttaaggtgtcctctagagatcattgtgcgtgataac
caatctaaaccaggggagacttcagccattgctagagaacttattagccgctatcgtgtg
gtggctctcattggagaggtttcctcgggacgcaccttggaggctgcgcctattgcccaa
agatatcatgttcctttgctggccaactctgcttccaatgacagggttacgaaaattggg
aactatgtttttcgcataagttatcgtgatagtcagcagggagaggttctagcacgatac
atatatctcttagggaaaaggaaggccgcacttctcgtggattctagcagagataacagt
gccaccatggccgacagttttaaaaagcagttcatcgcattgggtggcgacattgtagaa
aggcaaagttataatgctcacgacaaggatttccaggcccaggttactaccattaagaac
tctggcgctgactgcctttttctaccgggagtttatacagagtgtgccaccattatgaaa
caagcacggtctttgggattaaacctatccacatttggcggagattcctgggattctcca
gtttttgtcaatgtggcaggaaaggcggctgaaggagcagtcttcacaaacagcttttct
gctgatgatcccgatcctactgtacaatccttcgttcagagctatcggagtaaatatggc
caacatgctaagcctatggctcttgccgtaacaggttttgatgcgctcaaattaatggtg
aatgctattgagcgcgctaaggtcgacggtccagatgttaacctgaaagacccaggtagg
ctcaagcgttttcggcacgcgattcgtgatgcccttgcaaagacctgtaattatggagct
gttagcggtagcattacctttgacaaaaacggtgatcctgccaaagctatggtgctgttg
cgtgtttgccatgggcggtttgaattcatccgaaaggagcctcctcctcaatag
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