Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00645
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Entry
AMD24_00645 CDS
T04108
Symbol
fumC
Name
(GenBank) Fumarate hydratase class II
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00020
Citrate cycle (TCA cycle)
xii00620
Pyruvate metabolism
xii00720
Other carbon fixation pathways
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
Module
xii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xii_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMD24_00645 (fumC)
00620 Pyruvate metabolism
AMD24_00645 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
AMD24_00645 (fumC)
Enzymes [BR:
xii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
AMD24_00645 (fumC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
ALJ56811
UniProt:
A0A0P0G4I4
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Position
complement(682130..683584)
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AA seq
484 aa
AA seq
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MWVGSCLSIVISLNIAMSNNTTAYRTETDSIGEINVPTDRYYGAQTARSLIHFNIGKEVQ
PEELIKALGILKKACALANRELGKLSEKKACLIIQAANEIISGELNSHFPLRVWQTGSGT
QSNMNVNEVVSNRAIEIDGGVLGSKKPIHPNDDVNLSQSSNDVFPTAMNIAAASQVHNAL
LPMVRRLRDILAERQRKFSGIVKIGRTHLQDATPLTLGQEFSGYVALLETDLERLQAVLH
GLYALAIGGTAVGTGLNSHPLFGEIAAHHVAVLTGLPFFSAPNKFAALSAHNELVFASGA
LKTLACTLMKIANDVRWLASGPRCGLGELNIPENEPGSSIMPGKVNPTQSEALTMVAVEV
LGNDTAIGIAGSQGNFELNAFRPVIIHNFLNSVRLLKDAGSSFSSYCASGIEANNGRIDA
YVQTSLMLVTALNPVIGYDKAAQIARKAHKENLSLREATLTLGYLSGEQFDNIVRPENMT
HAAA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtagggagctgcctgagcattgtcatctctctcaatatcgctatgtctaacaat
accactgcctatcgtactgaaaccgacagcataggggaaattaacgttccaactgaccgt
tactatggggcgcagaccgcccgttcacttatccactttaatattggcaaagaggttcag
cccgaagaactaatcaaggccttaggcattctcaagaaagcttgtgctctcgccaatcga
gagcttggaaagctttctgagaaaaaggcttgtctcatcatccaagcagcgaacgaaatt
atctccggggagctaaacagtcattttcccttgcgggtttggcaaactgggagtggcacg
caaagcaatatgaatgtaaacgaagtagtttctaaccgtgccattgaaatagacgggggt
gtgcttggctccaaaaaaccaatccatcccaatgatgacgtaaatctgtcgcaatcttct
aatgatgtctttccaactgcaatgaatattgcggctgcctctcaggtacacaatgccttg
cttccaatggtccgtaggttaagagacatacttgctgaaaggcagaggaaattttcaggt
attgttaaaattgggcgtacccacctgcaagatgctactcctttaaccctaggccaagag
ttttctggttacgttgctctacttgagacggatttagagcggttgcaggccgtgcttcac
ggtctatatgctttagcgattggaggtactgccgtaggaactgggctaaactctcaccct
ctctttggggagattgccgctcaccatgttgcagtacttactggacttccctttttttct
gctcccaacaaatttgctgcactttctgcccataacgagctggtgtttgctagcggcgcc
ctcaaaactcttgcttgcactctcatgaagatcgccaacgatgtccgttggcttgcatct
ggtccacgttgcggcctcggtgaattgaacatccctgaaaacgaaccgggttcctctatt
atgccaggaaaagtaaaccccacccagtccgaagctttgaccatggtagcagtagaagta
ctaggaaacgatactgccattggaattgccggtagccagggcaattttgaactcaacgcc
tttagaccagttataatccacaactttcttaactctgtcagactgctcaaggatgctggt
agctctttcagcagttactgtgcctctggcatcgaggctaacaacggacgcatcgatgct
tacgtccaaacctctctcatgctagtcaccgccttaaatcccgtcattggatacgataaa
gccgcccaaattgccaggaaagctcacaaagaaaatcttagcctccgcgaggctaccttg
acacttggctatttaagcggggaacagtttgataatattgttcgccctgagaacatgact
catgccgccgcttga
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