Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00658
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Entry
AMD24_00658 CDS
T04108
Symbol
dapB
Name
(GenBank) 4-hydroxy-tetrahydrodipicolinate reductase
KO
K00215
4-hydroxy-tetrahydrodipicolinate reductase [EC:
1.17.1.8
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00261
Monobactam biosynthesis
xii00300
Lysine biosynthesis
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01230
Biosynthesis of amino acids
Module
xii_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMD24_00658 (dapB)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
AMD24_00658 (dapB)
Enzymes [BR:
xii01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.8 4-hydroxy-tetrahydrodipicolinate reductase
AMD24_00658 (dapB)
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Motif
Pfam:
DapB_C
DapB_N
Motif
Other DBs
NCBI-ProteinID:
ALJ56823
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Position
complement(698018..698779)
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AA seq
253 aa
AA seq
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MMIPPVRLLIAGSHGRMGKAVATCAREDPRFRISAEINSNDSFPRALSQSDVSIDFTQPE
ATLPFVKASAHAGKPIVIGTTGHSYAVGPTLAQYARAIPIVFSPNFSTGVNVLFWLTRKA
VEILGVDFDSEVIEMHHRHKRDIPSGTAARLEEILAEVHPSLCIPEKIEHSRQGVATATP
YSKRKIGVHSLRGGDIVGEHTVIFAGGGERLELAHKASSRNTFALGSLQAAIWVLRQPAG
LYSMQDVLGLLAR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgatgattcctcccgttcggctcctcatagctggtagtcatggtaggatgggaaaagcg
gttgccacgtgcgccagggaggacccgcgctttcgaatttccgctgaaatcaattctaac
gactccttcccaagagcactctcccagagtgacgtatctatcgactttactcagccggaa
gcaacgctgccatttgtcaaggcttcagcccatgccggtaaacctattgtcatcggtacc
acagggcattcctatgctgtaggtcctacccttgcacagtatgcgcgtgctatccctatt
gtcttttcccccaattttagcactggcgtgaatgttctcttctggcttacccgtaaggcc
gtggaaatcttgggcgtagactttgactcagaagttatagagatgcaccatcgacacaaa
agagacattcctagcggtaccgccgcaagactggaagaaattcttgcagaggtacaccct
tctctctgtattccagaaaagatagaacatagccgacaaggtgtagcaaccgctacacct
tactccaagcgtaagattggagtgcactccctccgaggaggggatatcgttggggaacac
actgtaatatttgctggtggtggagaacgtcttgaacttgctcacaaggcctccagccga
aatacctttgctttaggctctctgcaggctgctatctgggtgcttcggcaacctgctgga
ctttacagcatgcaggatgttcttgggttgctagcgagatga
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