Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00673
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Entry
AMD24_00673 CDS
T04108
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD24_00673 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xii01007
]
AMD24_00673 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00673 (hisS)
Enzymes [BR:
xii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
AMD24_00673 (hisS)
Amino acid related enzymes [BR:
xii01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AMD24_00673 (hisS)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AMD24_00673 (hisS)
Prokaryotic type
AMD24_00673 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
tRNA-synt_2
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
ALJ56838
UniProt:
A0A0P0GFS5
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All DBs
Position
714884..716233
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AA seq
449 aa
AA seq
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MPDRVGTPSLLSPANFDQNTTSPSIMQILPGFRDFYPLDMAKRNYLFSTLRRVVLSYGFV
EVDGPTLESTDLYKRKGGGELMGQLYQFMDKGGREVTIRPEMTLTVARMAARSEKHYRKP
MKWFSIGSFFRHERQQKGRLREFSQLNCDLIGEASFAADAELLALVIDCLRAFGLGPHDF
VVRLSNRTAWLRFCQERGVRVDQMEEFLQEVDRMERYPMGETAKKFAKFGVSLREVHDFV
ESKDSTHFSEVLDELSARGLSEYVEVDLGIVRGLLYYTGTVFEVFDQKKCLRAIAGGGRY
DQLISSVSNGRVILPAIGFGIGDVVLGELIETVPVAAEKMHTALASQPGCEVFVVIAEEN
RRKQALRLVQLLREEGKSVDFSLGVIRIEKQFRRAQQLRAQYLVVVGREWPQVKFQRSAF
HEASVCSYEKLAEHLKTDHPVAPNEVSNL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaccgtgtgggtacgccctcgctcctttctcctgctaattttgaccaaaatact
acaagtccttctattatgcagatactcccaggatttcgcgacttttatcccttggacatg
gcaaaaaggaactaccttttttctaccctacgacgggttgttcttagttatggatttgta
gaggtggacggtcctacgctggaaagcactgatctttacaaaagaaagggtggaggtgag
ctaatggggcaactttatcagtttatggacaaaggaggcagggaagtgaccatccgacca
gaaatgacactcacggttgcacgcatggctgcgaggtctgaaaaacactaccgtaaacct
atgaaatggttcagcattggtagcttctttcgtcatgagcggcaacagaagggtcggttg
cgagaattttctcaactaaactgtgatctcatcggcgaagcttcgtttgccgcggatgct
gagcttctggcactggtcatcgattgcctacgtgcgtttggattgggcccgcacgatttc
gtcgtacgactcagcaatcgcacagcatggcttcgtttctgtcaagaaagaggagtccgg
gtggatcagatggaggaatttctccaagaggtggatagaatggaacgctatccgatgggg
gaaactgccaaaaagttcgcaaaattcggagtgagcctacgggaggtgcatgactttgtc
gagtcaaaggactctacccattttagtgaagtgcttgatgagctctctgcccgtgggctt
tctgaatacgtagaagttgatttaggcattgtgcgagggctgctttactacaccggaaca
gtattcgaggtgtttgatcagaagaaatgcttgcgagctatagccggtggaggacgctac
gatcagctgatttcttccgtaagcaacgggagggtaattttgcctgcaatagggtttggc
atcggggacgtagtactcggagaattgatcgaaacagtcccagttgctgctgaaaaaatg
catactgccttagcgtctcaaccaggatgtgaagtctttgtggtcattgccgaagaaaat
cgaagaaagcaggccttgcggttagttcaactcttacgagaagaggggaaaagcgtagat
ttctccctgggggtgatacgtattgaaaagcagtttcggcgtgcgcagcagctgagggcc
caatatcttgtcgttgtcggaagagaatggcctcaggtcaaatttcaacgatcagctttc
cacgaggcatctgtctgttcatatgaaaaacttgcagagcatctgaaaactgatcatcct
gtcgcccctaatgaggtatcgaacttgtag
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