Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00799
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Entry
AMD24_00799 CDS
T04108
Symbol
dnaC
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMD24_00799 (dnaC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xii03032
]
AMD24_00799 (dnaC)
Enzymes [BR:
xii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AMD24_00799 (dnaC)
DNA replication proteins [BR:
xii03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMD24_00799 (dnaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
TIP49
AAA
divDNAB
Motif
Other DBs
NCBI-ProteinID:
ALJ56956
LinkDB
All DBs
Position
complement(841111..842493)
Genome browser
AA seq
460 aa
AA seq
DB search
MQKGTHPSDIHRTLPQSTDAEKGVLCSVLLSPEQTLDRCIERINDKHFHHPAHRIIYQAM
VELYKLSRPVEIIVLLQYLEDRQLLDRVGGEAVLYEILTFVPTAANASYYLDIVQEKFLL
RQVIFICTEMASRCYTEQGEVWTLLDELESRVLSIGEARYRNTFPQMKELVMAAVENIDR
LYKNRGGITGLSTGFKKLDQITNGLHGGEMFVIAARPSMGKTALAMNIAEHVALEIGKAV
GIFSLEMSSQQLVQRILCSSARLDLQKLRDGFISSNALHILFAAADRLAKCKIFIDDTTA
LSILEMRSKARRMKDTEGVELIVIDYLQLLRSSSRRGQENRQIEISEISYGIKALARELN
IPVIVLAQLNRQPETREGGKPRLSDLRESGAIEQDADVVALLVRPEVYEKGDRENGENLR
GRAELIIAKQRNGPIGEVELTFLKQFTRFETAELGREEGS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgcagaaggggactcatccatcagacattcataggaccctgcctcaaagtacagacgct
gagaagggtgtgttgtgctctgttctactttcccccgaacaaacccttgaccgctgtatt
gagcgcattaacgacaagcacttccatcatccagcgcataggattatctaccaggctatg
gtggaactttataagctctctcggccagtagaaatcatcgttctcctccagtatttagaa
gatcgccagctcctggatcgagtaggtggagaagctgttctttacgagattctgacattt
gttccaacggcagcgaatgctagctactatttggatatcgttcaggagaaatttttgctt
cgtcaggtgatttttatctgcacggaaatggcttcacgctgctacaccgagcagggcgag
gtttggaccttattggatgagttagaaagtcgagtactttctattggcgaagcgcgctac
cgcaacacatttccacagatgaaggaattggtcatggcggccgtcgagaatattgataga
ctctacaaaaaccgtggtggcatcaccggtttgtctactggttttaagaaattagatcaa
ataactaatggtttacatggtggggaaatgtttgtaatagctgctcgtccatccatgggt
aaaacagcgcttgccatgaatattgcagagcacgttgccttagaaatcgggaaggccgtt
ggtattttcagcctggaaatgagcagccagcagcttgtccagcgtattctttgctctagt
gctcgcctagatttgcaaaaacttcgcgacggattcatttccagtaatgctttgcatatc
ctttttgcagctgcggacagactagcgaagtgtaaaatcttcattgacgatactactgca
cttagcatcttggaaatgcgttctaaggcacgccgtatgaaggatactgaaggagtcgag
cttattgtaattgactatttgcagcttcttcgttcctcctcgcgaagagggcaggagaat
aggcaaattgagatttccgagatttcctatgggattaaggccttagctagggaactcaat
atccccgttattgtacttgctcaacttaatcgccagcctgaaacccgtgagggggggaag
ccacgcctctctgatcttcgtgagtcaggagcaattgagcaagatgctgatgtggtggct
cttctagtgcgtccagaagtttacgagaagggagatcgagaaaacggtgagaacctacgt
ggcagggcggaacttattatcgccaagcagagaaatggccccattggggaagtagagctt
accttcctaaagcagtttacacgctttgaaactgctgagcttggaagagaggagggaagc
taa
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