Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00821
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Entry
AMD24_00821 CDS
T04108
Symbol
glyQS
Name
(GenBank) Glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD24_00821 (glyQS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xii01007
]
AMD24_00821 (glyQS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xii03016
]
AMD24_00821 (glyQS)
03029 Mitochondrial biogenesis [BR:
xii03029
]
AMD24_00821 (glyQS)
Enzymes [BR:
xii01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
AMD24_00821 (glyQS)
Amino acid related enzymes [BR:
xii01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AMD24_00821 (glyQS)
Transfer RNA biogenesis [BR:
xii03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AMD24_00821 (glyQS)
Mitochondrial biogenesis [BR:
xii03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AMD24_00821 (glyQS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
GlyRS_ins_1
HypA
Zn_ribbon_8
zf-ChsH2
Motif
Other DBs
NCBI-ProteinID:
ALJ56978
LinkDB
All DBs
Position
861596..862954
Genome browser
AA seq
452 aa
AA seq
DB search
MPSAIRMEKIVSLCRRRGFIFPSSEIYGGLSGFWDYGPLGVELKRNLKNFWWRRVVHEQE
DVIGLDGSVIMNPAVWRASGHEESFIDPMVDCRSCKIRYRADQLPKGENTVPCCPHCGSR
DLTAPRSFHLMFKSFTGPVESKESLVYLRPETAQAIFVQFKNILDASRQKIPFGIAQVGK
VFRNEINPRNFTFRSREFEQMELEYFCKEEDSLFFLEKWLKERLRFYADIGIPGTKICVR
EIPEEERAFYSKKTYDLEYEFPFGTQELEGIAYRTNYDLVQHARSSGRSLGCFEEETRRH
FIPHVVEPSAGVDRAVLALLCEAFDEEMITGSLGKSEVRTVLRFHPRMAPIKCGVFPLLK
NRPALVAKAKEIAFSLRGHLNIAYDEAGAIGRRYRRQDEIGTPYGITVDFDTVSERNPVL
RNTVTLRHRDSMKQERIPISELKSFLLRGIEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtgctattcgtatggagaagatagttagcctctgtaggcgtaggggatttatc
tttccgtcctctgaaatctatggaggtctcagtggcttttgggattatgggccattggga
gtcgaactaaaacgtaatcttaagaacttctggtggcggcgtgtcgtccatgagcaggag
gatgtcatagggctagatggatctgtcataatgaaccctgctgtatggagagctagcggc
cacgaagaatccttcatcgatcccatggtggactgtcggtcctgcaaaatccggtaccgt
gcagaccagcttccaaaaggggaaaacactgttccctgttgcccacattgcgggagtcgc
gatttaactgctcctcgttcctttcatctcatgttcaagagctttacgggtcctgtagaa
agtaaggagagcctcgtctatttacgtcctgaaactgcgcaggctatttttgttcaattt
aaaaatatcctagatgcctctcgtcagaaaatcccctttgggatcgctcaagttggaaag
gtatttcgcaacgaaattaatccccgcaactttacctttcgctctcgcgagtttgagcaa
atggaattggagtacttttgcaaagaggaggacagccttttttttctagaaaaatggctg
aaggaaaggcttcgcttctatgccgacattggcattcccggtaccaagatttgcgtgcgc
gaaattcctgaagaagaacgtgctttttactctaaaaaaacttatgatctcgagtacgag
tttccttttgggactcaggaactagagggtattgcctatcgtaccaactacgaccttgtc
cagcatgctcgttccagcggtaggtctttagggtgttttgaagaagaaaccaggcgacac
tttattccccacgtggtagaacccagcgctggtgtagaccgtgcagttcttgctctcctt
tgtgaagcatttgacgaagaaatgataactggcagcctgggaaaatccgaagtccgtacc
gttctccgttttcatccacggatggcccccattaaatgtggagtctttcccctcctcaaa
aataggcccgcattggtagcaaaagctaaggaaattgctttctcccttcgtggccattta
aatatcgcctacgatgaggccggcgctatcggccgccgctacaggcggcaggatgagata
ggcaccccctatggcatcaccgttgattttgataccgtcagcgaaagaaaccctgtccta
cgtaatacagtcaccttacgtcaccgcgactccatgaaacaggaacgtattcccatctcc
gaactaaagtccttcctcctccgaggaatagaggaatga
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