Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00838
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Entry
AMD24_00838 CDS
T04108
Symbol
ilvD
Name
(GenBank) Dihydroxy-acid dehydratase
KO
K01687
dihydroxy-acid dehydratase [EC:
4.2.1.9
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00290
Valine, leucine and isoleucine biosynthesis
xii00770
Pantothenate and CoA biosynthesis
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01210
2-Oxocarboxylic acid metabolism
xii01230
Biosynthesis of amino acids
Module
xii_M00019
Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
AMD24_00838 (ilvD)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
AMD24_00838 (ilvD)
Enzymes [BR:
xii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.9 dihydroxy-acid dehydratase
AMD24_00838 (ilvD)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ALJ56995
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Position
879441..881198
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AA seq
585 aa
AA seq
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MFKLAVPDIFKTINFIMRKPDPSLRPYSSAAMDGPSRAPNRSMLYAVGFTERDFTKPQIG
IASTWSMVTPCNVHIDHLAQEAVKGVEAVGGKAIIFNTITISDGIAMGTRGMKYSLVSRE
VIADSIETVVGGENFDGFVAIGGCDKNIPACAMAIARMNRSAVFVYGGTILPGCVKGEKV
DIVSVFEAVGKHAEGKIGDSELHTMESCAIPGPGSCGGMYTANTMAAAVEALGLSLPNSS
AQVAVSEQKRLDCRQAGEAVVEMLRRGIRPHDILCREAMENAITVVIALGGSTNAVLHLL
AIAHAAGLQVTIEDFNRIGERVPVVADLRPSGHYFMSELVEIGGIVPLMRDLLHAGLLHG
GCLTVTGKTLKQNLVPFKDYPKGQRIIRPLEDPIKKDSHLVILKGNLAPSGAVAKITGKE
GEYFMGTAQVFNSEEEALQAILNGTIHRGHVIVIRYEGPKGGPGMREMLSPTSAVMGRGL
GKEVALITDGRFSGGTHGFVVGHITPEAFEGGPLAIVKNDDRIIIDAIQRIITVDILGKE
LEDRTLRWKRPSPRCRYGVLAKYAALVSSASYGAVTDASLERMSK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagctggctgttccagatattttcaagacgattaactttataatgaggaaacca
gatcccagtctccgtccctattcttccgctgccatggatggtcccagtcgggctcccaac
cgttcaatgttatatgctgtaggttttacggaaagagattttacgaagccccagataggc
attgcttctacatggagtatggtaactccttgtaatgtacatattgaccatctggcacaa
gaagcagttaagggcgtagaagctgtaggtggaaaagctattatcttcaataccattacc
atctcagacggcattgcaatggggaccagagggatgaaatactccctggtctctagggag
gttattgcagattccatcgagacagtggtaggtggagagaattttgatggcttcgttgct
ataggtggatgcgataaaaacattccggcgtgtgcaatggcaattgccaggatgaatcgg
tctgctgtcttcgtatacgggggaactattcttccgggctgcgtaaaaggggaaaaagtg
gacattgtttcggtattcgaggcagtcgggaagcatgcagagggcaaaataggcgattct
gaattacatactatggaatcctgtgctatccctggtccaggctcttgcggagggatgtat
accgctaacaccatggcagcagctgtagaggctctgggacttagtttaccaaacagttca
gcacaggtggctgtatccgagcagaagagacttgattgccgacaggccggagaggcggtt
gtggagatgctgaggcgtggcattcgccctcacgatatcctttgccgcgaagccatggag
aacgcgattactgtcgttattgcgttaggtggttctactaatgccgtcctccatctgctt
gccattgcgcatgctgcaggcctccaagtgactatagaagacttcaacagaataggtgaa
cgggtaccggtggtagccgatctcagaccgagtgggcactatttcatgtccgagcttgta
gaaatcggcggcattgtccccctaatgagggaccttttgcatgcaggactcctacatggc
ggatgtttaacagtcaccgggaagaccctaaaacaaaatcttgttcccttcaaggactat
cccaaaggtcagagaattatccgcccacttgaagatccaatcaaaaaggacagccatttg
gtaatattgaagggcaacttggcgccgagcggagccgtagcaaagattacaggaaaagag
ggtgagtattttatggggacagcgcaagtcttcaattcggaggaggaagctttgcaggcc
attctaaatggtacgatccatagagggcacgtaatcgtcattcgctatgaggggcctaaa
gggggacctgggatgcgcgaaatgctttccccgaccagcgcggtaatggggcgtggttta
ggtaaggaggtcgcgttgattactgatggacgcttctccggcggaacgcatggatttgtg
gtaggtcatattacaccagaagcatttgagggtggtccattggccatagtcaagaatgat
gatcggattattatcgatgctattcaacggattatcactgtggatatcctcgggaaagaa
ctcgaggatcgaactctgcggtggaaaaggcccagtccacgatgtcgctacggcgtcttg
gcaaaatatgccgccctagtaagctctgcatcctacggtgcagttacagatgcttcctta
gaaaggatgagcaaataa
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