Xanthomonas indica: Q7W82_02265
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Entry
Q7W82_02265 CDS
T10539
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xin Xanthomonas indica
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xin03032
]
Q7W82_02265
03400 DNA repair and recombination proteins [BR:
xin03400
]
Q7W82_02265
Enzymes [BR:
xin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q7W82_02265
DNA replication proteins [BR:
xin03032
]
Prokaryotic type
DNA Topoisomerases
Q7W82_02265
DNA repair and recombination proteins [BR:
xin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q7W82_02265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
XCI81009
UniProt:
A0AAU8I6J2
LinkDB
All DBs
Position
complement(520155..521384)
Genome browser
AA seq
409 aa
AA seq
DB search
MSNPSRSTAAAEAARARQSRQAASSAGLVYVSDQEPGIVRRRAGKGFGYRMPDGSAVRDA
ATLQRIRQLAIPPAYTEVWICTRDNGHLQATGRDARRRKQYRYHADWAQVRGDGKFERIV
AFGQALPRLRRRLRRDMALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLAFVKGGRARLQFRGKGGQEHDIEVDDVHLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGDSFTAKDFRTWGGTRAALQRLAALPLPDTGGERALAQAQNAVIRE
VSEALGNTPAVCRKAYIDPCVFDGWRCGRLHGLCEGVRGERQWDLITLKYLGRARTAARK
AAKATGRTAAKAPPLRKVARATRKGAAASAQGSGHRGKRKAAPGARKRA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgtcccgttccaccgccgcggccgaggcggcgcgtgcccggcagtcccgc
caggccgccagcagcgcgggcctggtctacgtcagcgaccaggagccaggcatcgtccgt
cgccgtgccggcaagggcttcggctatcgcatgcccgacggcagtgcggtgcgcgacgcc
gccaccctgcagcgcatccgccagctggcgatcccgccggcctataccgaggtgtggatc
tgcacgcgcgacaacggtcacctgcaggccaccggccgcgacgcgcgccggcgcaagcaa
taccgctaccacgccgactgggcgcaggtgcgcggcgacggcaagttcgagcgcatcgtc
gccttcggccaggccttgccacggctgcgtcggcgcctgcgccgcgacatggcgctgccc
ggctacccacgcgacaaggtgttggcgatggtggtggcgctgatggccgagaccctggtg
cgcgtgggcaacgccgaatacgcgcgcagcaaccgctcctatggcctgaccacgctgcgc
aaccgccacctggctttcgtcaagggcggccgcgcgcggctgcagttccgcggcaagggc
ggccaggagcacgacatcgaggtcgacgacgtgcacctggtcaagctgatccgcggctgc
cagcaactgcccgggcaggccctgttccagtaccgcgacgacgacggccagctgcagccg
gtggattcgggcgaggtcaacgactacctgcgcgaggcgatgggcgacagcttcaccgcc
aaggacttccgcacctggggcggcacccgcgccgcgctgcagcggctggccgcgctgccg
ctgccggacacgggcggcgagcgcgcgctggcgcaggcgcagaacgcggtgatccgggaa
gtgtccgaggcgctgggcaataccccggcggtgtgccgcaaggcctatatcgatccgtgc
gtgttcgacggctggcgctgcggtcgcctgcacgggctgtgcgagggcgtgcgcggcgag
cggcagtgggatctgatcacactgaagtatctggggcgggcacgcaccgcggcacgcaag
gcggccaaggctaccggccgcaccgcggcgaaggcgccgccgctgcgcaaggttgctcgg
gccacgcgcaagggcgcggcggcgagcgcgcagggcagcggtcatcgcggcaagcgcaag
gccgcgcccggggcccgcaagcgcgcttga
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